Job Description P45848 Confidence 3.96% Date Thu Jan 5 12:03:51 GMT 2012 Rank 92 Aligned Residues 87 % Identity 17% Template c3mdjB_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: er aminopeptidase, erap1, bound to the zinc aminopeptidase inhibitor,2 bestatin Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																						.	.	.	.	.	.
Query SS confidence												.																																																						.	.	.	.	.	.
Query Sequence		S	L	F	D	V	E	A	T	L	Q	.	P	D	G	V	L	D	I	K	E	N	I	H	F	Q	A	R	N	Q	Q	I	K	H	G	F	Y	R	D	L	P	R	L	W	M	Q	P	D	G	D	A	A	L	L	N	Y	H	I	V	G	V	T	R	D	G	.	.	.	.	.	.	I	P	E	P	W	H	L	D	W	H
Query Conservation												.																																																						.	.	.	.	.	.
Alig confidence												.																			.	.								.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																															.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	Y	D	L	L	I	H	A	N	L	T	T	L	T	F	W	G	T	T	K	V	E	I	T	A	S	Q	P	.	.	T	S	T	I	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	H	L	Q	I	S	R	A	T	L	R	K	G	A	G	E	R	L	S	E	E	P	L	Q	V	L	E	H
Template Known Secondary structure												T	T	T	T													S	S		.	.		S						.	.	.	.	.	.	.	.	.	.	.	.	.		S	S											S	S		S	S	T	T
Template Predicted Secondary structure																															.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.														.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L	M	S	I	V	V	G	D	K	Q	R	F	L	P	Q	G	D	Y	H	Y	Q	I	H	Y	Q	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	Q	E	Q	I	A	L	L	A	P	E	P	L	L	V	G	L	P	Y	T	V	V	I	H	Y	A	G	N
Template Known Secondary structure		T	T	T	T							S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions