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Job DescriptionP45848
Confidence4.33%DateThu Jan 5 12:03:51 GMT 2012
Rank80Aligned Residues96
% Identity10%Templatec3e6mD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:marr family transcriptional regulator; PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   285....290.........300.........310.........320.........330.........340.........350.........360....
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Query Sequence  PDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVV
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Template Sequence  GELTVGQLATLGV. . XEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKLAEISPLINDFHAELVGN. . . . .
Template Known Secondary structure  S
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   63......70..... ....80.........90.........100.........110.........120.........130.....
 
   365....370.........380.......
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Query Sequence  LTGRRNRVLRRAFLRMQKFYLPR
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Template Sequence  VDPDKLQTCIEVLGEILKGKTDY
Template Known Secondary structure  S


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   136...140.........150........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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