Job Description P45848 Confidence 51.49% Date Thu Jan 5 12:03:51 GMT 2012 Rank 6 Aligned Residues 116 % Identity 9% Template c3ciaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cold-active aminopeptidase; PDBTitle: crystal structure of cold-aminopeptidase from colwellia2 psychrerythraea Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.
Predicted Secondary structure																.																																																								.	.	.	.	.
Query SS confidence																.																																																								.	.	.	.	.
Query Sequence		E	E	G	I	S	L	F	D	V	E	A	T	L	Q	.	P	D	G	V	L	D	I	K	E	N	I	H	F	Q	A	R	N	Q	Q	I	K	H	G	F	Y	R	D	L	P	R	L	W	M	Q	P	D	G	D	A	A	L	L	N	Y	H	I	V	G	V	T	R	D	G	I	P	.	.	.	.	.	E	P	W	H	L
Query Conservation																.																																																								.	.	.	.	.
Alig confidence																.																				.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																																				.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	K	A	T	H	V	Y	L	D	L	N	V	D	F	D	K	K	S	L	S	G	F	A	E	L	S	L	D	W	F	T	D	N	.	K	A	P	L	I	L	D	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	I	H	R	V	M	A	K	N	S	Q	G	Q	W	V	K	V	N	Y	D	L
Template Known Secondary structure		T														T	T	T	T															S	S	.							B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T
Template Predicted Secondary structure																																				.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.														.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																									.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	W	H	I	G	L	M	S	I	V	V	G	D	K	Q	R	F	L	P	Q	G	D	Y	H	Y	Q	I	H	Y	Q	V	K	N	A	F	L	R	E	G	D	S	D	L	L	I	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	T	G	N	H	W	P	F	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																.	.	.																.	.	.	.	.	.																																				.
Template Sequence		A	K	R	D	D	V	L	G	S	K	L	T	I	N	.	.	.	T	P	L	N	A	K	K	V	R	V	Y	Y	N	S	T	.	.	.	.	.	.	E	K	A	T	G	L	Q	W	L	S	A	E	Q	T	A	G	K	E	K	P	F	L	F	S	Q	N	Q	A	I	H	A	R	S	W	I	.	P	I	Q	D	T	P
Template Known Secondary structure						S	S	S								.	.	.			T	T		S										.	.	.	.	.	.	T	T		T	T						G	G	G	S	S	S	S	S	S								T	T	T	T	G	G	G	T	S	.		B				T
Template Predicted Secondary structure																.	.	.																.	.	.	.	.	.																																				.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.
		162	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	T	R	F	S	L	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	R	V	T	Y	T	A	R	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions