Job Description P45848 Confidence 3.96% Date Thu Jan 5 12:03:51 GMT 2012 Rank 91 Aligned Residues 64 % Identity 8% Template c2yu3A_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase iii 39 kda PDBTitle: solution structure of the domain swapped wingedhelix in dna-2 directed rna polymerase iii 39 kda polypeptide Resolution UNK

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																												.					.	.	.	.	.	.
Query SS confidence																																												.					.	.	.	.	.	.
Query Sequence		H	L	E	D	Q	S	D	K	N	Q	Q	I	L	I	R	V	N	E	G	A	T	R	N	N	A	V	L	L	P	A	E	Q	L	L	L	E	A	L	F	R	K	G	.	D	K	V	V	.	.	.	.	.	.	L	T	G	R	R	N	R	V	L	R	R	A	F	L	R	M	Q	K
Query Conservation																																												.					.	.	.	.	.	.
Alig confidence																																												.					.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	D	L	L	R	S	N	T	G	L	L	Y	R	I	K	D	S	Q	N	A	G	K	M	K	G	S	D	N	Q	E	K	L	V	Y	Q	I	I	E	D	A	G	N	K	G	I	W	S	R	D	V	R	Y	K	S	N	L	P	L	T	E	I	N	K	I	L	K	N	L	E	S
Template Known Secondary structure																			S	S	S						S		S														T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions