Return to main results Retrieve Phyre Job Id

Job DescriptionP45848
Confidence14.86%DateThu Jan 5 12:03:51 GMT 2012
Rank19Aligned Residues27
% Identity11%Templatec2rh0B_
PDB info PDB header:nuclear proteinChain: B: PDB Molecule:nudc domain-containing protein 2; PDBTitle: crystal structure of nudc domain-containing protein 22 (13542905) from mus musculus at 1.95 a resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160.........170.........180....
Predicted Secondary structure 












Query SS confidence 


























Query Sequence  WPFEIYKTRFSLQFSNIAGNPFSEIDL
Query Conservation 
  

  
  

 

            
Alig confidence 


























Template Conservation 
 

  

 
 
 

     


 
 
Template Sequence  WYQTLEEVFIEVQVPPGTRAQDIQCGL
Template Known Secondary structure 
SS



TT

GGG
Template Predicted Secondary structure 







Template SS confidence 


























   21........30.........40.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions