|   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
. | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | T | I | G | N | F | D | G | V | H | R | G | H | R | A | L | L | Q | G | L | Q | E | E | G | R | K | R | N | L | P | V | M | V | M | L | F | E | P | Q | P | L | E | L | F | A | T | D | K | A | P | A | R | L | T | R | L | R | E | K | L | R | Y | L | A | E | C | G | . |
. |
V | D | Y | V | L | C | V | R | F | D |
Query Conservation |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |
| . | . |
|
|   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |
|   |
| . | . | . |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
Template Sequence |   |
V | V | Y | P | G | S | F | D | P | L | T | N | G | H | L | D | V | I | Q | R | A | S | R | L | F | E | K | V | . |
. |
. |
T | V | A | V | L | E | N | Q | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | S | A | E | E | R | L | A | I | I | R | E | A | T | A | H | L | A | N | V | E | A | A | T | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | . | . | . |  |  |  |  |  |
|
|
|
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | T |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | . | . | . |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
. | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | F | A | A | L | T | A | Q | N | F | I | S | D | L | L | V | K | H | L | R | V | K | F | L | A | V | G | D | D | F | R | F | G | A | G | R | E | G | D | F | L | L | L | Q | K | A | . |
. |
. |
. |
. |
G | M | E | Y | G | F | D | I | T | S | T | Q | T | F | C | E | G | G | V | R | I | S | S | T | A | V | R | Q |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
| . |   |   |   |   |   |   |   |   |
|   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | L | V | D | F | V | . |
R | R | V | G | A | Q | A | I | V | K | G | L | R | A | . |
. |
. |
. |
. |
. |
V | S | D | Y | E | Y | E | L | Q | M | A | H | L | N | R | Q | L | Y | P | G | L | E | T | L | F | I | L | A | . |
A | T | R | Y | S | F | V | S | S | T | M | V | K | E |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  | . |  |  | T | T |
| S |  |  |  |  |  |  |
| T | . | . | . | . | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
| . |
| G | G | G | T | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
72 | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
172 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
A | L | A | D | D | N |
Query Conservation |   |
  |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
Template Sequence |   |
I | A | R | Y | G | G |
Template Known Secondary structure |   |
 |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 |
  |