Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG40
Confidence100.00%DateThu Jan 5 11:28:03 GMT 2012
Rank5Aligned Residues122
% Identity30%Templated1n08a_
SCOP infoReductase/isomerase/elongation factor common domain Riboflavin kinase-like ATP-dependent riboflavin kinase-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.. .......210....... ..220.........230.........240.........250.........260.
Predicted Secondary structure 







.








....


















Query SS confidence 















.














. . . .











































Query Sequence  HPFAISGRVVHGDELG. RTIGFPTANVPLRRQ. . . . VSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLL
Query Conservation    
 
 
 
  
   
.
 







     ....  
  


   
       
  
 


  

       

 

 
Alig confidence 















.














....















.


























Template Conservation 


 
 
 

 
   


 







           
  



  
    .  
  
 


  

       

 


Template Sequence  YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQK. RVFPMVMSVGWNPYYKNKLRSAEVHLI
Template Known Secondary structure 



SSS
GGGGT



GGGTTTTTTTS
STT.
TT
SS

T
Template Predicted Secondary structure 
































.








Template SS confidence 















































































   22.......30.........40.........50.........60.........70... ......80.........90.........100
 
   262.......270.........280.........290.........300.........
Predicted Secondary structure  .



















Query SS confidence  .















































Query Sequence  . DVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGL
Query Conservation  .

  



  
 
 
   

 
 

     
  

  
   
      
Alig confidence  .















































Template Conservation   

  



  
 
     

 
 

 




  

  

  

  
  
Template Sequence  ERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDR
Template Known Secondary structure  T

S


TT







TS
Template Predicted Secondary structure 



















Template SS confidence 
















































   101........110.........120.........130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions