Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG40
Confidence29.16%DateThu Jan 5 11:28:03 GMT 2012
Rank121Aligned Residues70
% Identity16%Templated1gcya2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 






























Query SS confidence 














































































Query Sequence  LREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITS
Query Conservation   
 
   
   


 
    
      
  
 

  

   
    



 

 

    
    
       
  
 
Alig confidence 











































.......







..

















Template Conservation 
  

 

  


  


 
               

   

 
.......
   

  ..


 

  

  

 


Template Sequence  LRQQAATIAADGFSAIWMPVPWRDFSSWSKSGGGEGYFWHDFNK. . . . . . . NGRYGSDA. . QLRQAASALGGAGVKVLY
Template Known Secondary structure  TT
S


S




B


B

SSTT
SSS
S.......
SSS

..TT
Template Predicted Secondary structure 



























.......





..


Template SS confidence 














































































   3940.........50.........60.........70.........80.. .......90 .........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions