|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |
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|  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|
|
|  |  |  |  |
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|
| . | . |
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|
|  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
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|
Query Sequence |   |
I | R | G | I | H | N | L | S | Q | A | P | Q | E | G | C | V | L | T | I | G | N | F | D | G | V | H | R | G | H | R | A | L | L | Q | G | L | Q | E | E | G | R | K | R | N | L | P | V | M | V | M | L | F | E | P | Q | P | L | E | L | F | A | T | D | K | A | P | A | R | . |
. |
L | T | R | L | R | E | K | L | R | Y |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
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|   |
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|   |
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|   |   |   |
|   |   |   |   |   |   |   |
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|   |   |
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|   |   |   |
|   |   |   |   |   |   |   |   | . | . |
|   |   |   |
|   |
|   |   |   |
Alig confidence |   |
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| . | . |
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| . | . |
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Template Conservation |   |
|   |   |   |   |   |
|   |   |   | . | . |   |   |
|
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|   |
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|   |
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|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
Template Sequence |   |
I | K | N | Q | K | D | I | G | T | P | . |
. |
S | D | S | V | V | V | L | G | Y | F | D | G | I | H | K | G | H | Q | E | L | F | R | V | A | N | K | A | A | R | K | D | L | L | P | I | V | V | X | T | F | N | E | S | P | K | I | A | L | E | P | Y | H | P | D | L | F | L | H | I | L | N | P | A | E | R | E | R | K |
Template Known Secondary structure |   |
| S | S | G | G | G |
|
|
|
| . | . | S |
|  |  |  |  |  | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | T | T |
|
|
|  |  |  |  |  |  | S | S |
| T |  |  |  |  | S |
|
|
| G | G | G | G |
| B | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
7 | . | . | 10 | . | . | . | . | . | . | |
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
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|  |  |
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Query SS confidence |   |
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Query Sequence |   |
L | A | E | C | G | V | D | Y | V | L | C | V | R | F | D | R | R | F | A | A | L | T | A | Q | N | F | I | S | D | L | L | V | K | H | L | R | V | K | F | L | A | V | G | D | D | F | R | F | G | A | G | R | E | G | D | F | L | L | L | Q | K | A | G | M | E | Y | G | F | D | I | T | S | T | Q | T | F | C | E | G | G |
Query Conservation |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
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|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|
Alig confidence |   |
|
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| . |
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|
| . | . | . | . |
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|
Template Conservation |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |
|
|   |   | . |
|
|   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . |
|   |   |
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
L | K | R | E | G | V | E | E | L | Y | L | L | D | F | S | S | Q | F | A | S | L | T | A | Q | E | F | F | A | T | . |
Y | I | K | A | X | N | A | K | I | I | V | A | G | F | D | Y | T | F | G | S | D | K | K | T | A | E | D | L | K | N | Y | F | . |
. |
. |
. |
D | G | E | V | I | I | V | P | P | V | E | D | E | K |
Template Known Secondary structure |   |
 |  |  |  | T |
|
|  |  |  |  |  |
|
|
|  |  |  |  | T |
|
|  |  |  |  |  |  |  | . |  |  |  |  |  | T |  |  |  |  |  |  |  | T | T |
|
| B | T | T | T | T | B |
| S | T | T |  |  |  |  |
| . | . | . | . | S | S |  |  |  |  |  |
|
|
| B |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |
|
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|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
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|
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|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
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|  |  |  |
|
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|  |  |  |
|
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| . |
|
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|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
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| . |
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|
Query Sequence |   |
V | R | I | S | S | T | A | V | R | Q | A | L | A | D | D | N | L | A | L | A | E | S | L | L | G | H | P | F | A | I | S | G | R | V | V | H | G | D | E | L | G | R | T | I | G | F | P | T | A | N | V | P | L | R | . |
R | Q | V | S | P | V | K | G | V | Y | A | V | E | V | L | G | L | G | E | K | P | L | P | G | V |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |
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|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |
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|   |
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|   |   |   | . |   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
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| . | . | . | . | . | . |
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| . |
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| . |
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|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |
|   |   |
|   | . | . | . | . | . | . |
|
|
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|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |
|   |   | . |   |   |
|   |   |
|
Template Sequence |   |
G | K | I | S | S | T | R | I | R | Q | A | I | L | D | G | N | V | K | E | A | G | K | L | L | G | A | P | L | P | S | R | G | X | V | V | H | G | N | . |
. |
. |
. |
. |
. |
G | Y | P | T | A | N | L | V | L | L | D | R | T | Y | X | P | A | D | G | V | Y | V | V | D | V | E | I | Q | R | . |
Q | K | Y | R | A | X |
Template Known Secondary structure |   |
| B |
|
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
| S | S | B |
|
|
|
| S |  |  |  |  |  |  |  |  |  | T | T | . |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |
| . | . | . | . | . | . |
|
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|  |  |  |  |  |
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|
|
|  |  |  |  |  |  |  |  |
|
| . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
|
|
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|
|
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
. | . | . | 230 | . | . |
  |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
Query Sequence |   |
A | N | I | G | T | R | P | T | V | A | G | I | R | Q | Q | L | E | V | H | L | L | D | V | A | M | D | L | Y | G | R | H | I | Q | V | V | L | R | K | K | I | R | N | E | Q | R | F | A | S | L | D | E | L | K | A | Q | I | A | R | D | E | L | T | A | R | E | F |
Query Conservation |   |
  |
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |
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|
|   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
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|
| . | . |
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Template Conservation |   |
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Template Sequence |   |
A | S | V | G | K | N | V | T | F | D | E | . |
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A | R | F | E | V | N | I | F | D | F | N | Q | D | I | Y | G | E | T | V | X | V | Y | W | L | D | R | I | R | D | X | T | K | F | D | S | V | D | Q | L | V | D | Q | L | K | A | D | E | E | V | T | R | N | W |
Template Known Secondary structure |   |
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| B | T | T | T | B |
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|  |  |  |  |  |  | T | T |
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| T | T |
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| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | |
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250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
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