Job Description P0AG40 Confidence 98.57% Date Thu Jan 5 11:28:03 GMT 2012 Rank 47 Aligned Residues 152 % Identity 18% Template c3gmiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0348 protein mj0951; PDBTitle: crystal structure of a protein of unknown function from2 methanocaldococcus jannaschii Resolution 1.91 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	P	Q	E	G	C	V	L	T	I	G	N	F	D	G	V	H	R	G	H	R	A	L	L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	L	T	R	L	R	E	K	L	R	Y	L	A	E	C	G	V	D	Y	V	L
Query Conservation
Alig confidence																																.	.	.	.											.	.	.	.	.
Template Conservation																																.	.	.	.											.	.	.	.	.
Template Sequence		R	E	N	K	D	K	I	V	C	D	F	T	E	Y	N	P	L	H	K	G	H	K	Y	A	L	E	K	G	K	E	.	.	.	.	H	G	I	F	I	S	V	L	P	G	.	.	.	.	.	P	L	E	R	S	G	R	G	I	P	Y	F	L	N	R	Y	I	R	A	E	M	A	I	R	A	G	A	D	I	V	V
Template Known Secondary structure				T												T	T														T	.	.	.	.	S	S									.	.	.	.	.	T	T	S	B		T	T	S	S	B		S	S													T		S
Template Predicted Secondary structure																																.	.	.	.											.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																								.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	R	F	D	R	R	F	A	A	L	T	A	Q	N	F	I	S	D	L	L	V	.	.	K	H	L	R	V	K	F	L	A	V	G	D	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.									.								.	.										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.									.																			.	.	.	.	.	.
Template Sequence		E	G	P	P	.	.	M	G	I	M	G	S	G	Q	.	Y	M	R	C	L	I	K	M	F	Y	S	L	G	A	E	I	I	P	.	.	.	.	.	.	R	G	Y	I	P	E	K	T	M	E	K	V	I	D	C	I	N	K	G	Y	H	I	Q	V	K	P	Y	K	I	I	C	I	E	T	G	E	I	L	G	E	K
Template Known Secondary structure						.	.	G	G	G	S					.													T						.	.	.	.	.	.																		T	T							T	T					T	T	T						S
Template Predicted Secondary structure						.	.									.																			.	.	.	.	.	.
Template SS confidence
		117	.	.	120			.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
																									146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	G	F	D	I	T	S	T	Q	T	F	C	E	G	G	V	R	I	S	S	T	A	V	R	Q	A	L	A	D	D	N	L	A	L	A	E	S	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		L	N	I	D	N	Y	V	I	A	S	M	S	Q	M	I	Y	K	L	N	R	E	G	L	K	F	N	P	K	F	V	F	V	K	R	L	E	G	.	.	.	.	I	S	G	T	K	I	R	E	A	I	F	S	G	K	F	E	D	I	K	N	M	L
Template Known Secondary structure				G	G	G																T	T													S			.	.	.	.												T	T		G	G	G	T	G	G	G	S
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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