Job Description P0AG40 Confidence 55.85% Date Thu Jan 5 11:28:03 GMT 2012 Rank 68 Aligned Residues 157 % Identity 12% Template c3dahB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		L	S	Q	A	P	Q	E	G	C	V	L	T	I	G	N	F	D	G	V	H	R	G	H	R	A	L	L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	.	L	T	R	L	R	E	K	L	R	Y	L	A	E	C	G	V	D
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		I	Q	E	N	V	R	G	K	D	V	F	V	L	Q	S	T	C	A	P	T	N	D	N	L	M	E	L	M	I	M	V	D	A	L	K	R	A	S	A	G	R	I	T	A	A	I	P	Y	F	G	Y	A	R	Q	D	R	R	P	R	S	A	R	V	A	I	S	A	K	V	V	A	N	M	L	E	I	A	G	V	E
Template Known Secondary structure				S			B	T											S	S																		T	T	B	S							S	S		T	T	T	T			S		G	G	G		S																T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		89	90	.	.	.	.										.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	L	C	V	R	.	.	.	.	.	.	.	.	.	F	D	R	R	F	A	A	L	T	A	Q	N	F	I	S	D	L	L	V	K	H	L	R	V	K	F	L	A	V	G	D	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		R	I	I	T	M	D	L	H	A	D	Q	I	Q	G	F	F	D	I	P	V	D	N	I	Y	A	T	P	I	L	L	G	D	L	R	K	Q	N	Y	P	D	L	L	V	V	S	P	D	.	.	.	.	.	.	.	V	G	G	V	V	R	A	R	A	L	A	K	Q	L	N	C	D	L	A	I	G	E	V	E	G	R
Template Known Secondary structure							S		S		G	G	G	G	G	G		S	S							S												T		T	T						S	S	.	.	.	.	.	.	.	S	T	T												T									T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	S	T	Q	T	F	C	E	G	G	V	R	I	S	S	T	A	V	R	Q	A	L	A	D
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		T	C	V	I	M	D	D	M	V	D	T	A	G	T	L	C	K	A	A	.	.	Q	V	L	K	E
Template Known Secondary structure											S	S									.	.				T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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