Job Description P0AG40 Confidence 29.60% Date Thu Jan 5 11:28:03 GMT 2012 Rank 116 Aligned Residues 109 % Identity 12% Template c3cvyA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:re11660p; PDBTitle: drosophila melanogaster (6-4) photolyase bound to repaired2 ds dna Resolution 2.70 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure															.	.	.																.	.
Query SS confidence															.	.	.																.	.
Query Sequence		L	Q	G	L	Q	E	E	G	R	K	R	N	L	.	.	.	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	.	.	A	T	D	K	A	P	A	R	L	T	R	L	R	E	K	L	R	Y	L	A	E	C	G	V	D	Y	V	L	C	V	R	F	D	R	R	F	A	A	L	T	A	Q	N	F	I	S	D
Query Conservation															.	.	.																.	.
Alig confidence															.	.	.																.	.																																.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		L	S	H	I	F	T	A	A	N	A	A	P	G	R	Y	F	V	R	P	I	F	I	L	D	P	G	I	L	D	W	M	Q	V	G	A	N	R	W	R	F	L	Q	Q	T	L	E	D	L	D	N	Q	L	R	K	L	N	S	R	L	F	V	V	R	G	.	.	.	.	.	.	.	.	K	P	A	E	V	F	P	R
Template Known Secondary structure												S	T	T	S											T	T	T	T	T	T	S																								T	T								S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.									.	.	90	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	K	H	L	R	V	K	F	L	A	V	G	D	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	D	I	T	S	T	Q
Query Conservation
Alig confidence		.																	.	.
Template Conservation		.																	.	.
Template Sequence		.	I	F	K	S	W	R	V	E	M	L	T	F	E	T	D	I	.	.	E	P	Y	S	V	T	R	D	A	A	V	Q	K	L	A	K	A	E	G	V	R	V	E	T	H	C
Template Known Secondary structure		.						T											.	.	S																	T	T
Template Predicted Secondary structure		.																	.	.
Template SS confidence
			96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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