Job Description P0AG40 Confidence 99.51% Date Thu Jan 5 11:28:03 GMT 2012 Rank 22 Aligned Residues 169 % Identity 19% Template c3ag5A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pantothenate synthetase; PDBTitle: crystal structure of pantothenate synthetase from staphylococcus2 aureus Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		M	K	L	I	R	G	I	H	N	L	S	Q	A	P	Q	E	.	.	.	.	.	.	.	.	G	C	V	L	T	I	G	N	F	D	G	V	H	R	G	H	R	A	L	L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	L
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.									.	.	.																		.	.	.	.	.															.	.	.	.	.
Template Conservation																																		.	.	.																		.	.	.	.	.															.	.	.	.	.
Template Sequence		T	K	L	I	T	T	V	K	E	M	Q	H	I	V	K	A	A	K	R	S	G	T	T	I	G	F	I	P	T	M	G	A	.	.	.	L	H	D	G	H	L	T	M	V	R	E	S	V	S	T	N	D	.	.	.	.	.	I	T	I	V	S	V	F	V	N	P	L	Q	F	G	.	.	.	.	.	D	A	Y	P
Template Known Secondary structure																					T	T										S	S	.	.	.																S	S	.	.	.	.	.										G	G	G			.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.																		.	.	.	.	.															.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.													.	.	.	.	.	.	.		.	130	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		T	R	L	R	E	K	L	R	Y	L	A	E	C	G	V	D	Y	V	L	C	V	R	F	D	R	R	F	A	A	.	.	.	.	L	T	A	Q	N	F	I	S	D	L	L	V	K	H	L	R	V	K	F	L	.	.	.	.	.	.	.	.	.	.	.	.	A	V	G	D	D	F	R	.	F	G	A	G	R	E	G
Query Conservation																															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		R	Q	I	D	K	D	L	E	L	V	S	E	V	G	A	D	I	V	F	H	P	A	V	E	D	M	Y	P	G	E	L	G	I	D	V	K	V	G	P	L	A	D	V	L	E	G	A	K	R	P	G	H	F	D	G	V	V	T	V	V	N	K	L	F	N	I	V	M	P	D	Y	A	Y	F	G	K	K	D	A	Q
Template Known Secondary structure													T	T	T													S		S			S	S						G	G	G	T	T	T	T	G	G	G	S	T	T																			S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																.	.									.
Query SS confidence																.	.									.
Query Sequence		D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	.	.	D	I	T	S	T	Q	T	F	.	C	E	G	G	V	R	I	S	S	T	A	V	R	Q	A	L	A	D	D	N	L	A	L	A	E	S	L
Query Conservation																.	.									.
Alig confidence																.	.									.												.	.
Template Conservation																																						.	.
Template Sequence		Q	L	A	I	V	E	Q	M	V	K	D	F	N	H	A	V	E	I	I	G	I	D	I	V	R	E	A	D	G	L	A	K	S	S	R	N	.	.	V	Y	L	T	E	Q	E	R	Q	E	A	V	H	L
Template Known Secondary structure													T	T		S										B		T	T	S		B			G	G	G	.	.	G	G	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions