Job Description P0AG40 Confidence 33.55% Date Thu Jan 5 11:28:03 GMT 2012 Rank 101 Aligned Residues 106 % Identity 17% Template c2xrzA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase; PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion Resolution 2.20 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	L	T	R	L	R	E	K	L	R	Y	L	A	E	C	G	V	D	Y	V	L	C	V	R	F	D	R	R	F	A	A	L	T	A	Q	N	F	I	S	D	L	L	V	K	H
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.										.
Template Conservation																																																												.	.	.	.	.	.	.	.										.
Template Sequence		L	L	F	S	R	A	I	A	K	E	A	N	V	P	V	V	V	V	F	C	L	T	D	E	F	L	E	A	G	I	R	Q	Y	E	F	M	L	K	G	L	Q	E	L	E	V	S	L	S	R	K	K	I	P	S	F	F	L	R	.	.	.	.	.	.	.	.	G	D	P	G	E	K	I	S	R	.	F	V	K	D
Template Known Secondary structure												T	T											G	G	G	G	G	S																						T	T								.	.	.	.	.	.	.	.	S									.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.										.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.		.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	K	F	L	A	V	G	D	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	D	I	T	S	T	Q
Query Conservation
Alig confidence																			.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		Y	N	A	G	T	L	V	T	D	F	S	P	L	R	I	K	N	.	.	.	.	.	Q	W	I	E	K	V	I	S	G	I	S	I	P	F	F	E	V	D
Template Known Secondary structure		T	T		S									S					.	.	.	.	.									T			S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions