Job Description P0AG40 Confidence 100.00% Date Thu Jan 5 11:28:03 GMT 2012 Rank 1 Aligned Residues 308 % Identity 30% Template c2x0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribf; PDBTitle: crystal structure of modular fad synthetase from2 corynebacterium ammoniagenes Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	I	R	G	I	H	N	L	S	Q	A	P	Q	E	G	C	V	L	T	I	G	N	F	D	G	V	H	R	G	H	R	A	L	L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	L	T	R	L	R	E	K	L	R
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		M	D	I	W	Y	G	T	A	A	V	P	K	D	L	.	D	N	S	A	V	T	I	G	V	F	D	G	V	H	R	G	H	Q	K	L	I	N	A	T	V	E	K	A	R	E	V	G	A	K	A	I	M	V	T	F	D	P	H	P	V	S	V	F	L	P	R	R	A	P	L	G	I	T	T	L	A	E	R	F	A
Template Known Secondary structure							S	G	G	G	S		T	T		.								S			T	T																			T	T									S	S							S	T	T		S			B	S	S
Template Predicted Secondary structure																.
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.		.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	A	E	C	G	V	D	Y	V	L	C	V	R	F	D	R	R	F	A	A	L	T	A	Q	N	F	I	S	D	L	L	V	K	H	L	R	V	K	F	L	A	V	G	D	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	D	I	T	S	T	Q	T	F	C	E	G
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		L	A	E	S	F	G	I	D	G	V	L	V	I	D	F	T	R	E	L	S	G	T	S	P	E	K	Y	V	E	F	L	L	E	D	T	L	H	A	S	H	V	V	V	G	A	N	F	T	F	G	E	N	A	A	G	T	A	D	S	L	R	Q	I	C	Q	S	.	R	L	T	V	D	V	I	D	L	L	D	D	E
Template Known Secondary structure						T	T									T	T	T	S	S	S	S															T									T	T				S	G	G	G											T	T	T	.	T												T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.		.	.	.	.	1150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																											.															.																		.	.	.	.	.	.
Query SS confidence																																											.															.																		.	.	.	.	.	.
Query Sequence		G	V	R	I	S	S	T	A	V	R	Q	A	L	A	D	D	N	L	A	L	A	E	S	L	L	G	H	P	F	A	I	S	G	R	V	V	H	G	D	E	L	.	G	R	T	I	G	F	P	T	A	N	V	P	L	R	.	R	Q	V	S	P	V	K	G	V	Y	A	V	E	V	L	G	L	.	.	.	.	.	.
Query Conservation																																											.															.																		.	.	.	.	.	.
Alig confidence																																											.															.																		.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	R	I	S	S	T	T	V	R	E	F	L	S	E	G	D	V	A	R	A	N	W	A	L	G	R	H	F	Y	V	T	G	P	V	V	R	G	A	G	R	G	G	K	E	L	G	F	P	T	A	N	Q	Y	F	H	D	T	V	A	L	P	A	D	G	V	Y	A	G	W	L	T	I	L	P	T	E	A	P	V
Template Known Secondary structure		T				S										T	T										T	S									B			S	S		S	S	S		T	T	S		S							T	T	B					S											S			S
Template Predicted Secondary structure
Template SS confidence
		1159	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.
							233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	G	E	K	P	L	P	G	V	A	N	I	G	T	R	P	T	V	A	G	I	R	Q	Q	L	E	V	H	L	L	D	V	A	M	D	L	Y	G	R	H	I	Q	V	V	L	R	K	K	I	R	N	E	Q	R	F	A	S	L	D	E	L	K	A	Q	I	A	R	D	E	L	T	A	R	E	F	F
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		S	G	N	M	E	P	E	V	A	Y	A	A	A	I	S	V	G	T	N	P	T	F	G	D	E	Q	R	S	V	E	S	F	V	L	D	R	D	A	D	L	Y	G	H	D	V	K	V	E	F	V	D	H	V	R	A	M	E	K	F	D	S	V	E	Q	L	L	E	V	M	A	K	D	V	Q	K	T	R	T	L	L
Template Known Secondary structure				S			T	T													T	T	S	S	S										T	T						T	T																		S	S
Template Predicted Secondary structure
Template SS confidence
		1239	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.
		308	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1319	1320	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions