Job Description P0AG40 Confidence 40.87% Date Thu Jan 5 11:28:03 GMT 2012 Rank 81 Aligned Residues 81 % Identity 21% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		E	K	L	R	Y	L	A	E	C	G	V	D	Y	V	L	C	V	R	F	D	R	R	F	A	A	L	T	A	Q	N	F	I	S	D	L	L	V	K	H	L	R	V	K	F	L	A	V	G	D	.	.	.	.	.	.	.	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	I	G	L	L	A	T	V	G	V	T	E	V	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y
Template Known Secondary structure											T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T				T	T	S				T	T																	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.																					.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	S	T	Q	T	F	C	E	G	G	V	R	I	S	S	T	A	V	R	Q	A	L	A	D	D	N	L
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		P	T	I	N	L	G	I	V	G	D	N	P	D	D	L	.	L	N	A	L	N	E	G	I	S	R	A	D	V
Template Known Secondary structure											S						.												S
Template Predicted Secondary structure																	.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.		.	.	.	.	.	560	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions