Job Description P0AG40 Confidence 97.27% Date Thu Jan 5 11:28:03 GMT 2012 Rank 51 Aligned Residues 155 % Identity 18% Template c1xnjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1 Resolution 1.98 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.			.	.	.	.	90
Predicted Secondary structure																																																																	.	.	.	.							.	.
Query SS confidence																																																																	.	.	.	.							.	.
Query Sequence		G	C	V	L	T	I	G	N	F	D	G	V	H	R	G	H	R	A	L	L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	L	T	R	L	R	E	K	L	.	.	.	.	R	Y	L	A	E	C	.	.	G	V	D	Y	V
Query Conservation																																																																	.	.	.	.							.	.
Alig confidence																																											.	.	.	.	.									.									.	.	.	.							.	.
Template Conservation																																											.	.	.	.	.									.
Template Sequence		D	A	V	S	A	F	Q	L	R	N	P	V	H	N	G	H	A	L	L	M	Q	D	T	H	K	Q	L	L	E	R	G	Y	R	R	P	V	L	L	L	H	P	.	.	.	.	.	L	G	G	W	T	K	D	D	.	D	V	P	L	M	W	R	M	K	Q	H	A	A	V	L	E	E	G	V	L	N	P	E	T	T
Template Known Secondary structure		S								S	S																					T		S	S								.	.	.	.	.	B		S				T	T	.	S																T	T	S	S		G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.									.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.						.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130									.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																			.																						.			.	.	.	.	.	.	.	.
Query SS confidence																			.																						.			.	.	.	.	.	.	.	.
Query Sequence		L	C	V	R	F	D	R	R	F	A	A	L	T	A	Q	N	F	.	I	S	D	L	L	V	K	H	L	R	V	K	F	L	A	V	G	D	D	F	R	.	F	G	.	.	.	.	.	.	.	.	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	D	I	T	S	T	Q	T	F	C	E	G
Query Conservation																			.																						.			.	.	.	.	.	.	.	.
Alig confidence																			.																						.			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	I	F	P	S	P	M	M	Y	A	G	P	T	E	V	Q	W	H	C	R	A	R	M	V	A	G	A	N	F	Y	I	V	G	R	D	P	A	G	M	P	H	P	E	T	G	K	D	L	Y	E	P	S	H	G	A	K	V	L	T	M	A	P	G	L	I	T	L	E	I	V	P	F	R	V	A	A	Y	N
Template Known Secondary structure						B																						T	T		S						S	S	T	T			B		T	T	T		S	B	S	S		T	T										T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		161	.																	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	S	S	T	A	V	R	Q	A	L	A	D	D	N
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	K	K	R	M	D	Y	Y	D	S	E	H	H	E	D	F	E	F	I	S	G	T	R	M	R	K	L	A	R	E	G	Q
Template Known Secondary structure		T	T	T	T							S	T	T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions