Job Description P0AG40 Confidence 100.00% Date Thu Jan 5 11:28:03 GMT 2012 Rank 3 Aligned Residues 261 % Identity 33% Template c1t6zB_ PDB info PDB header:transferase Chain: B: PDB Molecule:riboflavin kinase/fmn adenylyltransferase; PDBTitle: crystal structure of riboflavin bound tm379 Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	T	I	G	N	F	D	G	V	H	R	G	H	R	A	L	L	Q	G	L	Q	E	E	G	R	K	R	N	L	P	V	M	V	M	L	F	E	P	Q	P	L	E	L	F	A	T	D	K	A	P	A	R	L	T	R	L	R	E	K	L	R	Y	L	A	E	C	G	V	D	Y	V	L	C	V	R	F	D	R	R
Query Conservation
Alig confidence																																															.	.																											.	.					.
Template Conservation																																															.	.																											.	.					.
Template Sequence		V	V	S	I	G	V	F	D	G	V	H	I	G	H	Q	K	V	L	R	T	M	K	E	I	A	F	F	R	K	D	D	S	L	I	Y	T	I	S	Y	P	P	E	Y	F	L	.	.	P	D	F	P	G	L	L	M	T	V	E	S	R	V	E	M	L	S	R	Y	A	R	T	V	V	L	.	.	D	F	F	R	.
Template Known Secondary structure									T	T																				T									S			G	G	G	G	S	.	.	S	S				B	S	S											T	T	S						.	.					.
Template Predicted Secondary structure																																															.	.																											.	.					.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	L	T	A	Q	N	F	I	S	D	L	L	V	K	H	L	R	V	K	F	L	A	V	G	D	D	F	R	F	G	A	G	R	E	G	D	F	L	L	L	Q	K	A	G	M	E	Y	G	F	D	I	T	S	T	Q	T	F	C	E	G	G	V	R	I	S	S	T	A	V	R	Q	A	L	A	D	D	N	L
Query Conservation
Alig confidence																.	.	.																											.	.	.	.
Template Conservation																.	.	.																											.	.	.	.
Template Sequence		I	K	D	L	T	P	E	G	F	V	E	R	Y	L	.	.	.	S	G	V	S	A	V	V	V	G	R	D	F	R	F	G	K	N	A	S	G	N	A	S	F	L	R	.	.	.	.	K	K	G	V	E	V	Y	E	I	E	D	V	V	V	Q	G	K	R	V	S	S	S	L	I	R	N	L	V	Q	E	G	R	V
Template Known Secondary structure				S	S											.	.	.	T	T								S	S			B	S	G	G	G		B							.	.	.	.		T	T												T	T															T		T
Template Predicted Secondary structure																.	.	.																											.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		A	L	A	E	S	L	L	G	H	P	F	A	I	S	G	R	V	V	H	G	D	E	L	G	R	T	I	G	F	P	T	A	N	V	P	L	R	R	Q	.	.	V	S	P	V	K	G	V	Y	A	V	E	V	L	G	L	G	E	K	P	L	P	G	V	A	N	I	G	T	R	P	T	V	A	G	I	R	Q	Q	L
Query Conservation																																									.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.												.	.																																	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Template Sequence		E	E	I	P	A	Y	L	G	R	Y	F	E	I	E	G	I	V	H	.	.	.	.	.	.	.	.	.	.	F	P	T	A	N	I	D	R	G	N	E	K	L	V	D	L	K	R	G	V	Y	L	V	R	V	H	L	P	D	G	K	K	K	F	G	V	M	N	V	G	F	N	V	K	Y	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T					S	S										.	.	.	.	.	.	.	.	.	.										S	S		B					S										S	S	S																.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.											.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	H	L	L	D	V	A	M	D	L	Y	G	R	H	I	Q	V	V	L	R	K	K	I	R	N	E	Q	R	F	A	S	L	D	E	L	K	A	Q	I	A	R	D	E	L	T	A	R	E	F	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	Y	I	L	D	F	E	G	D	L	Y	G	Q	R	L	K	L	E	V	L	K	F	M	R	D	E	K	K	F	D	S	I	E	E	L	K	A	A	I	D	Q	D	V	K	S	A	R	N	M	I	D
Template Known Secondary structure						T	T			S			B	T																		S	S
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions