Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG40
Confidence68.81%DateThu Jan 5 11:28:03 GMT 2012
Rank64Aligned Residues140
% Identity10%Templatec1dkrB_
PDB info PDB header:transferaseChain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDY
Query Conservation           




 




 


 

  
   
       




  

   
        
   
 
   
   


 
Alig confidence 















































































Template Conservation 
   


  
 



     

 
 


    


  

 

  



  





    

 



 

 

   
 
 
Template Sequence  IEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLETAGATR
Template Known Secondary structure  SS

TT




SSTT
SSS
TT

S
SS

SS


T

Template Predicted Secondary structure 








































Template SS confidence 















































































   4950.........60.........70.........80.........90.........100.........110.........120........
 
   90.... .....100.........110.........120.........130.........140.........150......
Predicted Secondary structure  .........




























Query SS confidence 




. . . . . . . . .





























































Query Sequence  VLCVR. . . . . . . . . FDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQT
Query Conservation 
    .........
      
  
 

  

   
    



 

 

    
    
       
  
 

  
Alig confidence 




.........































.......






















Template Conservation 




 
       
  
   
     
   
        





....... 

  

   
  
        
Template Sequence  VIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPD. . . . . . . HGGVTRARKLADRLKAPIAIIDK
Template Known Secondary structure  S
SSGGGGGG
SS


TT

SSSS.......GGGTT


Template Predicted Secondary structure 
















.......




Template SS confidence 











































































   129130.........140.........150.........160.........170.... .....180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions