 |
Job Description | P39347 | Confidence | 23.56% | Date | Thu Jan 5 11:59:37 GMT 2012 |
Rank | 47 | Aligned Residues | 36 |
% Identity | 14% | Template | d1qu6a1 |
SCOP info | dsRBD-like
| dsRNA-binding domain-like
| Double-stranded RNA-binding domain (dsRBD)
|
Resolution | UNK |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | G | S | K | Y | W | R | L | Q | Y | R | Y | E | G | K | Q | K | M | L | A | L | G | V | Y | P | E | I | T | L | A | D | A | R | V | R | R | D | E | A |
Query Conservation |   |
  |   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   | . | . | . | . |
|
|
|   |
|
|   |   |
|
|   |   |
Template Sequence |   |
P | P | H | D | R | R | F | T | F | Q | V | I | I | D | G | R | E | F | P | E | G | E | G | R | . |
. |
. |
. |
S | K | K | E | A | K | N | A | A | A | K | L |
Template Known Secondary structure |   |
T | T | T | B |
|
|  |  |  |  |  |  | S | S | S | S |
|
|
|  |  |  |
|
| . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|