Job Description P39347 Confidence 99.81% Date Thu Jan 5 11:59:37 GMT 2012 Rank 10 Aligned Residues 189 % Identity 12% Template d1f44a2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		N	R	Q	H	R	P	A	L	E	L	K	R	I	P	E	L	L	T	K	I	D	S	Y	T	G	R	P	L	T	R	W	.	.	A	I	E	L	T	L	L	I	F	I	R	S	S	E	L	R	F	A	R	W	S	E	I	D	F	E	A	S	I	W	T	I	P	P	E	R	E	P	I	P	G	V	K	H	S	H	R
Query Conservation																																	.	.
Alig confidence																																	.	.																																													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		R	A	K	Q	A	L	A	F	E	R	T	D	F	D	Q	V	R	S	L	M	E	N	S	D	R	C	Q	D	I	R	N	L	A	F	L	G	I	A	Y	N	T	L	L	R	I	A	E	I	A	R	I	R	V	K	D	I	S	R	T	D	G	G	R	M	L	I	H	I	G	R	G	V	E	K	A	L	S	.	.	.
Template Known Secondary structure																						T	T																														B	G	G	G					G	G	G																.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.														.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	K	M	R	T	T	H	L	V	P	L	S	T	Q	A	L	A	I	L	K	Q	I	K	Q	F	Y	G	A	H	D	L	I	F	I	G	D	H	D	S	H	K	P	M	S	E	N	T	V	N	S	A	L	R	V	M	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	K	V	E	V	C	G	H
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	G	V	T	K	L	V	E	R	W	I	S	V	S	G	V	A	D	D	P	N	N	Y	L	F	C	R	V	R	K	N	G	V	A	A	P	S	A	T	S	Q	L	S	T	R	A	L	E	G	I	F	E	A	T	H	R	L	I	Y	G	A	K	D	D	S	G	Q	R	Y	L	A	W	S	G	H
Template Known Secondary structure		.	.	.	.	.																G	G	G	S	T	T	S	B	S	S			B		T	T	S		B				S	S																						S			T	T			T	T	S	S			T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	R	T	M	A	C	S	S	L	V	E	S	G	L	W	S	R	D	A	V	E	R	Q	M	S	H	M	A	R	N	S	V	R	A	A	Y	I	H	K	A	E	H	L	E	E	R	R	L	M	L	Q	W	W	A	D
Query Conservation
Alig confidence																	.																				.							.	.
Template Conservation																	.																				.							.	.
Template Sequence		S	A	R	V	G	A	A	R	D	M	A	R	A	G	V	.	S	I	P	E	I	M	Q	A	G	G	W	T	N	V	N	I	V	M	N	.	F	I	R	N	L	D	.	.	S	E	T	G	A	M	V	R	L	L	E	D
Template Known Secondary structure														T	T		.										T										.		T	T	T			.	.	S										T	T
Template Predicted Secondary structure																	.																				.							.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions