Job Description P39347 Confidence 99.87% Date Thu Jan 5 11:59:37 GMT 2012 Rank 6 Aligned Residues 163 % Identity 16% Template d1aiha_ SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.50

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	H	R	P	A	L	E	L	K	R	I	P	E	L	L	T	K	I	D	S	Y	T	G	R	P	L	T	R	W	A	I	E	L	T	L	L	I	F	I	R	S	S	E	L	R	F	A	R	W	S	E	I	D	F	E	A	S	I	W	T	I	P	P	E	R	E	P	I	P	G	V	K	H	S	H	R	G	S	K
Query Conservation
Alig confidence																									.																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	E	L	A	F	L	Y	E	R	D	I	Y	R	L	L	A	E	C	D	N	S	R	.	N	P	D	L	G	L	I	V	R	I	C	L	A	T	G	A	R	W	S	E	A	E	T	L	T	Q	S	Q	V	M	P	Y	K	I	T	F	T	N	T	K	S	K	K	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T	S	S	.	S	T	T																				T		B	T	T	T			T	T						S	S	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	T	H	L	V	P	L	S	T	Q	A	L	A	I	L	K	Q	I	K	Q	F	Y	G	A	H	D	L	I	F	I	G	D	H	D	S	H	K	P	M	S	E	N	T	V	N	S	A	L	R	V	M	G	Y	D	T	K	V	E	V	C	G	H	G	F	R	T	M	A	C	S	S	L	V	E	S	G	L	W
Query Conservation
Alig confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Sequence		.	.	.	.	R	T	V	P	I	S	D	E	L	F	D	M	L	P	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	R	L	F	N	D	A	Y	E	S	F	E	N	A	V	L	R	A	E	I	E	L	P	K	G	Q	L	T	H	V	L	R	H	T	F	A	S	H	F	M	M	N	G	G	.
Template Known Secondary structure		.	.	.	.													S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B	S	S														T	T					T	T		T	T	T													T	T		.
Template Predicted Secondary structure		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template SS confidence
						235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250															.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	D	A	V	E	R	Q	M	S	H	M	A	R	N	S	V	R	A	A	Y	I	H	K	A	E	H	L	E	E	R	R	L	M	L	Q	W	W
Query Conservation
Alig confidence																			.									.	.
Template Conservation																			.									.	.
Template Sequence		N	I	L	V	L	K	E	I	L	G	H	S	T	I	E	M	T	.	M	R	Y	A	H	F	A	P	.	.	S	H	L	E	S	A	V	K	F	N
Template Known Secondary structure											T		S	S					.	G	G	G	G	G	G	S		.	.			T	T						S
Template Predicted Secondary structure																			.									.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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