Return to main results Retrieve Phyre Job Id

Job DescriptionP39347
Confidence79.74%DateThu Jan 5 11:59:37 GMT 2012
Rank38Aligned Residues84
% Identity15%Templated1a0pa1
SCOP infoSAM domain-like lambda integrase-like, N-terminal domain lambda integrase-like, N-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100........ .110.........120.........130.........140.........150...
Predicted Secondary structure 







.








Query SS confidence 

































.












































Query Sequence  EVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALG. ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS
Query Conservation 
                                 .      
                   
                  
Alig confidence 

































.















......






















Template Conservation    

  
   
  
  

  
   
  
   
              
    ......    
     



 

  
   
Template Sequence  EQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALL. . . . . . AERLSSARLLSAVRRLFQYLYRE
Template Known Secondary structure  TT
S
TS

TTT

......S


T
Template Predicted Secondary structure 









......
Template SS confidence 















































































   910.........20.........30.........40.........50......... 60.........70.........80..
 
   154.....160....
Predicted Secondary structure 










Query SS confidence 










Query Sequence  GLIDYNPAQEM
Query Conservation             
Alig confidence 










Template Conservation    
  

   
Template Sequence  KFREDDPSAHL
Template Known Secondary structure  TSSSS
TTS

Template Predicted Secondary structure 










Template SS confidence 










   90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions