Job Description P39347 Confidence 98.15% Date Thu Jan 5 11:59:37 GMT 2012 Rank 22 Aligned Residues 103 % Identity 9% Template c3lysC_ PDB info PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f Resolution 2.80 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		S	K	A	R	T	F	K	E	V	A	I	E	W	H	G	T	.	N	K	K	W	S	E	D	H	A	H	R	V	L	K	S	L	E	D	N	L	F	A	A	L	G	E	R	N	I	A	E	L	K	T	R	D	L	L	A	P	I	K	A	V	E	M	S	G	R	L	E	V	A	A	R	L	Q	Q	R	T	T	A	I
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		P	I	K	Q	E	I	S	E	Y	F	K	D	W	X	E	L	Y	K	K	N	A	I	D	E	X	T	Y	K	G	Y	E	Q	T	L	K	Y	L	K	T	Y	X	P	N	V	L	I	S	E	I	T	A	S	S	Y	Q	R	A	L	N	K	F	A	E	T	H	A	K	A	S	T	K	G	F	H	T	R	V	R	A	S
Template Known Secondary structure					S	B													T	T	T	T	S																			S	S	S		B	T	T	T															T	T	S
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Y	A	V	Q	S	G	L	I	D	Y	N	P	A	Q	E	M	A	G	A	V	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	C	L	I	E	E	G	R	L	Q	K	D	F	T	T	R	A	V	V	K	G	L	E
Template Known Secondary structure									T		S	S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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