Job Description P39347 Confidence 98.65% Date Thu Jan 5 11:59:37 GMT 2012 Rank 16 Aligned Residues 117 % Identity 45% Template c2kj9A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e Resolution UNK

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	D	K	V	E	Q	S	K	A	R	T	F	K	E	V	A	I	E	W	H	G	T	N	K	K	W	S	E	D	H	A	H	R	V	L	K	S	L	E	D	N	L	F	A	A	L	G	E	R	N	I	A	E	L	K	T	R	D	L	L	A	P	I	K	A	V	E	M	S	G	R	L	E	V	A	A	R	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	V	Q	E	K	R	N	N	T	R	A	F	K	T	V	A	K	S	W	F	A	T	K	T	T	W	S	E	D	Y	Q	R	S	V	W	T	R	L	E	T	Y	L	F	P	D	I	G	N	K	D	I	A	E	L	D	T	G	D	L	L	V	P	I	K	K	I	E	K	L	G	Y	L	E	I	A	M	R	V	K
Template Known Secondary structure			T	T	T	S	S	S	S	S		S	B											T			S	S															T	S	S	T	T	G	G	G	S	B	G	G	G															T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	T	T	A	I	M	R	Y	A	V	Q	S	G	L	I	D	Y	N	P	A	Q	E	M	A	G	A	V	A	S	C	N	R	Q	H	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	A	T	A	I	M	R	Y	A	V	Q	Q	K	M	I	R	F	N	P	A	Y	D	L	E	G	A	V	Q	K	L	E	H	H	H	H	H
Template Known Secondary structure														T	T	S	S	S	S								S		S	S	S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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