Job Description P39347 Confidence 98.23% Date Thu Jan 5 11:59:37 GMT 2012 Rank 20 Aligned Residues 104 % Identity 12% Template c2khqA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b Resolution UNK

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		71	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		R	T	F	K	E	V	A	I	E	W	H	G	T	.	N	K	K	W	S	E	D	H	A	H	R	V	L	K	S	L	E	D	N	L	F	A	A	L	G	E	R	N	I	A	E	L	K	T	R	D	L	L	A	P	I	K	A	V	E	M	S	G	R	L	E	V	A	A	R	L	Q	Q	R	T	T	A	I	M	R	Y
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		I	T	F	A	D	Y	F	Y	Q	W	Y	E	V	N	K	L	P	H	V	S	E	S	T	K	R	H	Y	E	S	A	Y	K	H	I	K	D	H	F	R	H	K	L	L	K	D	I	K	R	T	E	Y	Q	K	F	L	N	E	Y	G	L	T	H	S	Y	E	T	I	R	K	L	N	S	Y	I	R	N	A	F	D	D
Template Known Secondary structure			B													T	G	G	G	S																				S	S		B	G	G	G																	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	S	G	L	I	D	Y	N	P	A	Q	E	M	A	G	A	V	A	S	C	N	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	H	E	G	Y	V	I	K	N	P	T	Y	K	A	E	L	H	A	S	V	L	E	H	H
Template Known Secondary structure					T	T						G	G	G	G						G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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