Job Description P39347 Confidence 98.09% Date Thu Jan 5 11:59:37 GMT 2012 Rank 25 Aligned Residues 113 % Identity 12% Template c2kd1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dna integration/recombination/invertion protein; PDBTitle: solution nmr structure of the integrase-like domain from2 bacillus cereus ordered locus bc_1272. northeast3 structural genomics consortium target bcr268f Resolution UNK

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																		.																																																	.
Query SS confidence																		.																																																	.
Query Sequence		Q	S	K	A	R	T	F	K	E	V	A	I	E	W	H	G	.	T	N	K	K	W	S	E	D	H	A	H	R	V	L	K	S	L	E	D	N	L	F	A	A	L	G	E	R	N	I	A	E	L	K	T	R	D	L	L	A	P	I	K	A	V	E	M	S	.	G	R	L	E	V	A	A	R	L	Q	Q	R	T	T
Query Conservation																		.																																																	.
Alig confidence																		.																																																	.
Template Conservation
Template Sequence		E	P	S	K	L	S	Y	G	E	Y	L	E	S	W	F	N	T	K	R	H	S	V	G	I	Q	T	A	K	V	L	K	G	Y	L	N	S	R	I	I	P	S	L	G	N	I	K	L	A	K	L	T	S	L	H	M	Q	N	Y	V	N	S	L	R	D	E	G	L	K	R	G	T	I	E	K	I	I	K	V	I	R
Template Known Secondary structure				S		S	B																													T	T	T					T	T	S	S	B	G	G	G																	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	M	R	Y	A	V	Q	S	G	L	I	D	Y	N	P	A	Q	E	M	A	G	A	V	A	S	C	N	R	Q	H	R	P	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	L	E	H	A	I	D	L	E	L	I	T	K	N	V	A	A	K	T	K	L	P	K	A	D	K	E	E	L	E	H	H	H	H
Template Known Secondary structure										T	T	S		S	S		T	T	T	T					S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions