Job Description P39347 Confidence 93.02% Date Thu Jan 5 11:59:37 GMT 2012 Rank 32 Aligned Residues 108 % Identity 19% Template c2b9sA_ PDB info PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex Resolution 2.27 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		L	T	R	W	A	I	E	L	T	L	L	I	F	I	R	S	S	E	.	.	.	.	.	.	.	.	.	.	.	L	R	F	A	R	W	S	E	I	D	F	E	A	.	S	I	W	T	I	P	P	E	R	E	P	I	P	G	V	K	H	S	H	R	G	S	K	M	R	T	T	H	L	V	P	L	S	T	Q	A	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.														.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	A	V	A	M	Y	F	I	D	R	L	A	L	R	V	G	N	E	K	G	E	D	E	A	D	T	V	G	C	C	S	L	R	V	E	H	I	Q	L	M	P	D	N	I	V	R	F	D	F	L	G	K	D	S	I	R	.	.	.	.	.	.	.	.	.	.	.	Y	Q	N	D	V	A	V	L	P	E	V	Y
Template Known Secondary structure																							T	T	S						G	G	G		B	G	G	G					T	T	S									G	G	G			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.												.	.	.	360	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	K	Q	I	K	Q	F	Y	G	A	H	D	L	I	F	I	G	D	H	D	S	H	K	P	M	S	E	N	T	V	N	S	A	L	R	V	M	G	Y	D	T	K	V	E	V	C	G	H	G	F	R	T	M	A	C	S	S	L	V	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		A	L	L	Q	R	F	T	R	R	K	S	P	G	M	D	I	F	.	.	.	.	.	.	.	D	Q	L	N	P	T	Q	L	N	D	H	L	K	S	F	M	.	.	.	.	D	G	L	S	A	K	V	F	R	T	Y	N	A	S	I	T	L	D
Template Known Secondary structure									T	T			T	T	S	B	T	T	.	.	.	.	.	.	.	T	T											T	T	T	S	.	.	.	.	T	T			T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.								.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions