Job Description P39347 Confidence 99.87% Date Thu Jan 5 11:59:37 GMT 2012 Rank 7 Aligned Residues 270 % Identity 16% Template c1a0pA_ PDB info PDB header:dna recombination Chain: A: PDB Molecule:site-specific recombinase xerd; PDBTitle: site-specific recombinase, xerd Resolution 2.50 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		K	A	R	T	F	K	E	V	A	I	E	W	H	G	T	N	K	K	W	S	E	D	H	A	H	R	V	L	K	S	L	E	D	N	L	F	A	A	L	G	E	.	R	N	I	A	E	L	K	T	R	D	L	L	A	P	I	K	A	V	E	M	S	G	R	L	E	V	A	A	R	L	Q	Q	R	T	T	A	I	M
Query Conservation																																											.
Alig confidence																																											.																		.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		Q	D	L	A	R	I	E	Q	F	L	D	A	L	W	L	E	K	N	L	A	E	N	T	L	N	A	Y	R	R	D	L	S	M	M	V	E	W	L	H	H	R	G	L	T	L	A	T	A	Q	S	D	D	L	Q	A	L	L	A	E	.	.	.	.	.	.	R	L	S	S	A	R	L	L	S	A	V	R	R	L	F
Template Known Secondary structure																	T	T		S																						T	S			T	T	T												S	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	A	V	Q	S	G	L	I	D	Y	N	P	A	Q	E	M	A	G	A	V	A	S	C	N	R	Q	H	R	P	A	L	E	L	K	R	I	P	E	L	L	T	K	I	D	S	Y	T	G	R	P	L	T	R	W	A	I	E	L	T	L	L	I	F	I	R	S	S	E	L	R	F	A	R	W	S	E	I	D	F
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	L	Y	R	E	K	F	R	E	D	D	P	S	A	H	L	K	D	L	.	.	.	.	.	.	.	.	.	.	.	S	E	A	Q	V	E	R	L	L	Q	A	P	L	I	D	Q	P	L	E	L	R	D	K	A	M	L	E	V	L	Y	A	T	G	L	R	V	S	E	L	V	G	L	T	M	S	D	I	S	L
Template Known Secondary structure							T	T	S	S	S	S		T	T	S						.	.	.	.	.	.	.	.	.	.	.												S		T	T	S																								T	T		B	G	G	G			T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	I	W	T	I	P	P	E	R	E	P	I	P	G	V	K	H	S	H	R	G	S	K	M	R	T	T	H	L	V	P	L	S	T	Q	A	L	A	I	L	K	Q	I	K	Q	F	Y	G	A	H	D	L	I	F	I	G	D	H	D	S	H	K	P	M	S	E	N	T	V	N	S	A	L	R	V	M	G	Y
Query Conservation
Alig confidence																						.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		R	Q	G	V	V	R	V	I	G	K	G	N	K	E	R	L	V	P	L	G	.	.	.	.	.	.	.	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	L	L	N	G	V	S	I	D	V	L	F	P	S	Q	R	A	Q	Q	M	T	R	Q	T	F	W	H	R	I	K	H	Y	A	V	L	A	G
Template Known Secondary structure		T	T	T							S	S	S									.	.	.	.	.	.	.														T						T	T					B	S	S	B		T	T	S	S	B																	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	K	V	E	V	C	G	H	G	F	R	T	M	A	C	S	S	L	V	E	S	G	L	W	S	R	D	A	V	E	R	Q	M	S	H	M	A	R	N	S	V	R	A	A	Y	I	H	K	A	E	H	L	E	E	R	R	L	M	L	Q
Query Conservation
Alig confidence																										.														.	.	.											.	.
Template Conservation																										.														.	.	.											.	.
Template Sequence		I	D	S	E	K	L	S	P	H	V	L	R	H	A	F	A	T	H	L	L	N	H	G	A	.	D	L	R	V	V	Q	M	L	L	S	D	L	S	.	.	.	T	T	Q	I	Y	T	H	V	A	T	.	.	E	R	L	R	Q	L	H	Q
Template Known Secondary structure				G	G	G																			S	.	S		G	G	G	S	S							.	.	.											.	.
Template Predicted Secondary structure																										.														.	.	.											.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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