Job Description P0A6W0 Confidence 97.43% Date Thu Jan 5 11:04:02 GMT 2012 Rank 11 Aligned Residues 229 % Identity 20% Template d2dcfa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.40

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		45	.	.	.	.	50	.	.	.	.				.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure												.	.	.			.	.																	.	.																				.	.	.											.	.	.
Query SS confidence												.	.	.			.	.																	.	.																				.	.	.											.	.	.
Query Sequence		I	C	T	V	D	G	Q	L	F	Q	.	.	.	A	G	.	.	D	A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	.	.	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	.	.	.	D	P	S	G	S	P	F	N	S	L	.	.	.	V	Q	L	E	M	E	Q	G	I	P
Query Conservation												.	.	.			.	.																	.	.																				.	.	.											.	.	.
Alig confidence												.	.	.			.	.																	.	.																				.	.	.											.	.	.
Template Conservation
Template Sequence		L	V	L	R	G	T	E	V	V	A	E	Y	Y	R	A	G	F	A	P	D	D	R	H	L	L	M	A	V	S	K	S	L	C	G	T	V	V	G	A	L	V	D	E	G	R	I	D	P	A	Q	P	V	T	E	Y	V	P	E	L	A	G	S	V	Y	D	G	P	S	V	L	Q	V	L	D	M	Q	I	S	I	D
Template Known Secondary structure						T	T									T	T			T	T						T	T																T	T	S			T	T	S	B	G	G	G	T		G	G	G	T	T	S	T	T	S	S		B						T	T		B			S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		112	.	.																																															.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	N	A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R	Q	R	M	L	E	V	V	R	G	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	E	D	Y	V	D	P	A	S	E	V	Q	T	H	D	R	S	A	G	W	R	T	R	R	H	G	D	P	A	D	T	Y	E	F	L	T	T	L	R	G	D	G	S	T	G	E	F	Q	Y	C	S	A	N	T	D	V	L	A	W	I	V	E	R	V	T	G	L	R	Y	V	E	A	L	S	T	Y	L	W	A
Template Known Secondary structure						S	S		T	T	S										T	S	S				T	T			S	S							T					S		B	S	S																					S										T	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H	D	V	T	T	V	L	Q	N	Y	F	H	Y	C	A	L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	K	A	I	H	I	D	E	P	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																													.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																													.	.
Template Sequence		K	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	R	D	A	T	I	T	V	D	T	T	.	.	.	G	F	G	F	A	N	G	G	V	S	C	T	A	R	D	L	A	R	V	G	R	M	M	L	D	G	G	V	.	.	A	P	G	G	R	V
Template Known Secondary structure		G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S						B		T	T	.	.	.			B		T	T	T																		T	T	T		.	.		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																													.	.
Template SS confidence
		246	.	.																											.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.															.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		V	T	P	M	Q	A	R	Q	I	N	A	L	M	A	T	S	G	M	Y	Q	N	A	G	E	F	A	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	L	P	A	K	S	G	V	G	G	G	I	V	A	I	V	P	H	E	.	M	A	I	A	V	W	S	P	E	L	D	D	A	G	N	S	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		V	S	E	D	W	V	R	R	V	L	A	G	G	S	H	E	A	M	T	D	K	G	F	T	N	T	F	P	D	G	S	Y	T	R	Q	W	W	C	T	G	N	E	R	G	N	V	S	G	I	G	I	H	G	Q	N	L	W	L	D	P	L	T	D	S	V	I	V	K	L	S	S	W	P	D	P	D	T	E	H	W
Template Known Secondary structure		S														T	T	T											T	T					T	T							T	T								T	T	T							G	G	G	T										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		291	.	.			.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	G	I	.	.	A	V	L	E	Q	L	T	K	Q	L	G
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		H	R	L	Q	N	G	I	L	L	D	V	S	R	A	L	D
Template Known Secondary structure																T	S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions