 |
Job Description | P0A6W0 | Confidence | 85.06% | Date | Thu Jan 5 11:04:02 GMT 2012 |
Rank | 69 | Aligned Residues | 61 |
% Identity | 31% | Template | d1yqsa1 |
SCOP info | beta-lactamase/transpeptidase-like
| beta-lactamase/transpeptidase-like
| beta-Lactamase/D-ala carboxypeptidase
|
Resolution | 1.05 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | A | M | D | N | A | I | L | E | N | I | L | R | Q | V | R | P | L | I | G | Q | G | K | V | A | D | Y | I | P | A | L | A | T | V | D | G | S | R | L | G | I | A | I | C | T | V | . |
D | G | Q | L | F | Q | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | A | Q | E | R | F | S | I | Q | S | I | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
| . |
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
Template Sequence |   |
L | P | A | P | D | D | T | G | L | Q | A | V | L | H | T | A | L | S | . |
. |
. |
Q | G | A | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | M | V | R | V | D | D | N | G | T | I | H | Q | L | S | E | G | V | A | D | R | A | T | G | R | A | I | T | T | T | D | R | F | R | V | G | S | V | T |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T |
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | B | S |
| T | T | T |
|
| B |
|
| T | T |
| B |  |  |
| G | G | G |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
. | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | S | L | V | V | A | M | R | H | Y |
Query Conservation |   |
|   |
|   |   |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |
|
|
Template Sequence |   |
K | S | F | S | A | V | V | L | L | Q | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|