Job Description P0A6W0 Confidence 97.09% Date Thu Jan 5 11:04:02 GMT 2012 Rank 16 Aligned Residues 214 % Identity 16% Template d1vqqa3 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.80

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100												.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	.	.	.	.	.	.	.	.	.	.	.	L	V	Q	L	E	M	E	Q	G	I	P	R	N	P	F	.	.	.	.	.	.	.	.	.	I	N
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	I	T	T	S	P	G	S	T	Q	K	I	L	T	A	M	I	G	L	N	N	.	.	.	.	.	.	.	.	.	.	K	T	L	D	D	K	T	S	Y	K	I	D	G	K	G	W	Q	K	D	K	S	W	G	G	Y	N	V	T	R	Y	E	V	V	N	G	N	I	D	L	K	Q	A	I	E	S	S	D	N
Template Known Secondary structure		T	T	S		B			G	G	G												T	.	.	.	.	.	.	.	.	.	.	T	S	S		T	T							S	S				S	S	G	G	G	T	T						S	S														T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.											.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R	Q	R	M	L	E	V	V	R	G	L	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H	D	V	T	T	V	L	Q	N	Y	F	H	Y	C	A
Query Conservation
Alig confidence													.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	F	A	R	V	A	L	E	L	G	.	.	.	.	.	.	S	K	K	F	E	K	G	M	K	K	L	G	V	G	E	D	I	P	S	D	Y	P	F	Y	N	A	Q	I	S	N	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	N	E	I	L	L	A	D	S	G	Y	G	Q	G	E
Template Known Secondary structure													.	.	.	.	.	.											T	T	T	T	S					S	S						B	S		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									T	T		S	S
Template Predicted Secondary structure													.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.							.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.																.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																																											.	.						.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.																																											.	.						.
Query Sequence		L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	.	.	.	.	.	.	.	.	.	.	.	K	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M	A	T	S	G	M	Y	Q	N	A	G	E	F	A	W	R	V	G	L	P	A	.	.	K	S	G	V	G	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.																																											.	.						.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																										.																	.	.						.
Template Conservation																																																									.
Template Sequence		I	L	I	N	P	V	Q	I	L	S	I	Y	S	A	L	E	N	N	G	N	I	N	A	P	H	L	L	K	D	T	K	N	K	V	W	K	K	N	I	I	S	K	E	N	I	N	L	L	T	D	G	M	Q	Q	V	.	V	N	K	T	H	K	E	D	I	Y	R	S	Y	A	N	L	I	G	K	S	G	T	A	E
Template Known Secondary structure			B	B											G	G	G	T	T	T						B			T	T	S										S																.			T	T	T	T	T	T	T			T	T	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.		.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
								264	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure		.	.	.	.	.	.									.	.
Query SS confidence		.	.	.	.	.	.									.	.
Query Sequence		.	.	.	.	.	.	G	G	I	V	A	I	V	P	.	.	H	E	M	A	I	A	V	W	S	P	E	L	D	D	A	G	N	S	L	A	G	I	A	V	L	E	Q	L	T	K	Q	L
Query Conservation		.	.	.	.	.	.									.	.
Alig confidence		.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		L	K	G	R	Q	I	G	W	F	I	S	Y	D	K	D	N	P	N	M	M	M	A	I	N	V	K	D	V	Q	D	K	G	M	A	S	Y	N	A	K	I	S	G	K	V	Y	D	E	L
Template Known Secondary structure															T	T	S		S											T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions