 |
Job Description | P0A6W0 | Confidence | 90.14% | Date | Thu Jan 5 11:04:02 GMT 2012 |
Rank | 52 | Aligned Residues | 122 |
% Identity | 20% | Template | d1m6ka_ |
SCOP info | beta-lactamase/transpeptidase-like
| beta-lactamase/transpeptidase-like
| beta-Lactamase/D-ala carboxypeptidase
|
Resolution | 1.50 |
|
 |
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | A | W | L | M | K | S | F | G | N | F | H | H | D | . |
. |
. |
. |
. |
V | T | T | V | L | Q | N | Y | F | H | Y | C | A | L | K | M | S | C | V | E | L | A | R | T | F | V | F | L | A | N | Q | G | K | A | I | H | I | D | E | P | V | V | T | P | M | Q | A | R | Q | I | N | A | L | M | A | T | S | G | M | Y |
Query Conservation |   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |
| . | . | . | . | . |   |   |   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|
|
|   |
|   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
K | I | K | N | Y | L | K | D | F | D | Y | G | N | Q | D | F | S | G | D | E | R | N | N | G | L | T | E | A | W | L | E | S | S | L | K | I | S | P | E | E | Q | I | Q | F | L | R | K | I | I | N | H | N | L | . |
. |
. |
. |
. |
. |
. |
P | V | K | N | S | A | I | E | N | T | I | E | N | M | Y | L | Q | D | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| T | T |
|
|
|
|
|
|
|
|
|
|  |  |  |  | T | T | S | S | S | S |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . | . | . | . | . | S | S |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
|
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | N | A | G | E | F | A | W | R | V | G | L | P | A | K | S | G | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | I | V | A | I | V | P | H | E | M | A | I | A | V | W | . |
. |
S | P | E | L | D | D | A | G | N | S | L | A | G | I | A | V | L | E | Q | L | T | K | Q | L | G | R |
Query Conservation |   |
|   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   | . | . |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |
|
|   |
|
|   |   |   |   |
|
Alig confidence |   |
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
Template Sequence |   |
N | . |
. |
. |
. |
. |
. |
. |
S | T | K | L | Y | G | K | T | G | A | G | F | T | A | N | R | T | L | Q | N | G | W | F | E | G | F | I | I | S | K | S | G | H | K | Y | V | F | V | S | A | L | T | G | N | L | G | S | N | L | T | S | S | I | K | A | K | K | N | A | I | T | I | L | N | T | L | N | L |
Template Known Secondary structure |   |
T | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | |
|
|
|
|
|
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|