Job Description P0A6W0 Confidence 97.04% Date Thu Jan 5 11:04:02 GMT 2012 Rank 17 Aligned Residues 245 % Identity 16% Template d1buea_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.64

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		K	V	A	D	Y	I	P	A	L	A	T	V	D	G	S	R	L	G	I	A	I	C	T	V	.	D	G	Q	L	F	Q	A	G	D	A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	L	V	Q
Query Conservation																										.
Alig confidence																										.									.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	I	D	E	I	K	N	L	E	T	D	F	N	G	R	I	G	V	Y	A	L	D	T	G	S	G	K	S	F	S	Y	R	.	A	N	E	R	F	P	L	C	S	S	F	K	G	F	L	A	A	A	V	L	K	G	.	.	.	.	.	.	.	.	.	.	.	S	Q	D	N	R	L	N	L	N	Q	I	V	N
Template Known Secondary structure		T	T												T	S									T	T	T							S	.	T	T	S					G	G	G	G												.	.	.	.	.	.	.	.	.	.	.			T	T	S	S		T	T
Template Predicted Secondary structure																																			.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.												.	.	.	.	.	.	.	90	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	M	E	Q	G	I	P	R	N	P	F	I	N	A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R	Q	R	M	L	E	V	V	R	G	L	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		Y	N	T	R	S	L	E	F	H	S	P	I	T	T	.	.	.	.	.	.	.	.	.	K	Y	K	D	N	G	M	S	L	G	D	M	A	A	A	A	L	Q	Y	S	D	.	.	.	.	.	.	N	G	A	T	N	I	I	L	E	R	Y	I	G	G	P	E	G	M	T	K	F	M	R	S	I	G	D	E	D	F
Template Known Secondary structure			T	T	S				S	S						.	.	.	.	.	.	.	.	.		T	T	T	T														S			.	.	.	.	.	.											T	T													T	T		S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		184	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																																																									.	.
Query SS confidence				.	.	.	.																																																																									.	.
Query Sequence		D	V	.	.	.	.	T	T	V	L	Q	N	Y	F	H	Y	C	A	L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	K	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M	A	T	S	G	M	Y	Q	N	A	G	E	F	A	W	R	V	G	L	P	.	.
Query Conservation				.	.	.	.																																																																									.	.
Alig confidence				.	.	.	.																															.	.	.	.	.	.	.	.																																			.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		R	L	D	R	W	E	L	D	L	N	T	A	I	P	G	D	E	R	D	T	S	T	P	A	A	V	A	K	S	L	K	T	L	A	L	G	.	.	.	.	.	.	.	.	N	I	L	S	E	H	E	K	E	T	Y	Q	T	W	L	K	G	N	T	T	G	A	A	R	I	R	A	S	V	P	S	D	W	V	V	G
Template Known Secondary structure		B			S		T	T	G	G	G				T	T			T	T																	S	.	.	.	.	.	.	.	.	S	S	S														T		S	S		T	T	T	G	G	G	G	S		T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		258	.	260	.	.	.	.	.						.	.	.	.	270			.	.			.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure										.	.	.	.	.						.	.			.	.								.	.
Query SS confidence										.	.	.	.	.						.	.			.	.								.	.
Query Sequence		A	K	S	G	V	G	G	G	.	.	.	.	.	I	V	A	I	V	.	.	P	H	.	.	E	M	A	I	A	V	W	.	.	S	P	E	L	D	D	A	G	N	S	L	A	G	I	A	V	L	E	Q	L	T	K	Q	L	G
Query Conservation										.	.	.	.	.						.	.			.	.								.	.
Alig confidence										.	.	.	.	.						.	.			.	.								.	.
Template Conservation
Template Sequence		D	K	T	G	S	C	G	A	Y	G	T	A	N	D	Y	A	V	V	W	P	K	N	R	A	P	L	I	I	S	V	Y	T	T	K	N	E	K	E	A	K	H	E	D	K	V	I	A	E	A	S	R	I	A	I	D	N	L	K
Template Known Secondary structure								S	S	T	T											T	T	S												S		T	T																		T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions