Job Description P0A6W0 Confidence 96.79% Date Thu Jan 5 11:04:02 GMT 2012 Rank 21 Aligned Residues 233 % Identity 15% Template c3qhyA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:beta-lactamase; PDBTitle: structural, thermodynamic and kinetic analysis of the picomolar2 binding affinity interaction of the beta-lactamase inhibitor protein-3 ii (blip-ii) with class a beta-lactamases Resolution 2.06 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																																																						.
Query SS confidence																			.																																																						.
Query Sequence		A	L	A	T	V	D	G	S	R	L	G	I	A	I	C	T	V	.	D	G	Q	L	F	Q	A	G	D	A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	L	.	V	Q	L	E	M	E	Q	G
Query Conservation																			.																																																						.
Alig confidence																			.									.																																													.
Template Conservation																												.
Template Sequence		Q	L	E	K	K	F	D	A	R	L	G	V	Y	A	I	D	T	G	T	N	Q	T	I	A	Y	R	.	P	N	E	R	F	A	F	A	S	T	Y	K	A	L	A	A	G	V	L	L	Q	Q	N	S	T	K	K	L	D	E	V	I	T	Y	T	K	E	D	L	V	D	Y	S	P	V	T	E	K	H	V	D	T	G
Template Known Secondary structure								T										T	T	T							S	.	T	T						G	G	G													S		G	G	G	G	G	S						G	G	G			S	S		T	T	T	T	T	S	T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																											.	.	.												.
Query SS confidence																											.	.	.												.
Query Sequence		I	P	R	N	P	F	I	N	A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	.	.	.	R	Q	R	M	L	E	V	V	R	G	L	.	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H	D	V
Query Conservation																											.	.	.												.
Alig confidence																											.	.	.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	L	G	E	I	A	E	A	A	V	R	Y	S	D	N	T	A	G	N	I	L	F	H	K	I	G	G	P	K	G	Y	E	K	A	L	R	Q	M	G	D	R	V	T	M	S	D	R	F	E	T	E	L	N	E	A	I	P	G	D	I	R	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											T	T												T	T			S		B					T	T	G	G	G				T	T			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		T	T	V	L	Q	N	Y	F	H	Y	C	A	L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	K	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M	A	T	S	G	M	Y	Q	N	A	G	E	F	A	W	R	V	G	L	P	.	.	A	K	S	G	V	G
Query Conservation																																																																										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																																			.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	K	A	I	A	T	N	L	K	A	F	T	A	G	.	.	.	.	.	.	.	.	N	A	L	P	N	H	K	R	N	I	L	T	K	W	M	K	G	N	A	T	G	D	K	L	I	R	A	G	V	P	T	N	W	V	V	A	D	K	S	G	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																S	.	.	.	.	.	.	.	.	S	S	S													B	S		G	G	G	T	T	T					S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
																181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		264							.	.	.	.	.	270	.	.	.			.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure			.	.	.	.	.	.										.	.							.	.
Query SS confidence			.	.	.	.	.	.										.	.							.	.
Query Sequence		G	.	.	.	.	.	.	G	I	V	A	I	V	P	H	E	.	.	M	A	I	A	V	W	.	.	S	P	E	L	D	D	A	G	N	S	L	A	G	I	A	V	L	E	Q	L	T	K	Q	L
Query Conservation			.	.	.	.	.	.										.	.							.	.
Alig confidence			.	.	.	.	.	.										.	.							.	.
Template Conservation
Template Sequence		S	Y	G	T	R	N	D	I	A	I	V	W	P	P	N	R	A	P	I	I	I	A	I	L	S	S	K	D	E	K	G	A	T	Y	D	N	Q	L	I	A	E	A	A	E	V	I	V	N	A	F
Template Known Secondary structure		T	T	T											T	T	S												S	S	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions