|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | A | L | A | T | V | D | G | S | R | L | G | I | A | I | C | T | V | . |
D | G | Q | L | F | Q | A | G | D | A | Q | E | R | F | S | I | Q | S | I | S | K | V | L | S | L | V | V | A | M | R | H | Y | S | E | E | E | I | W | Q | R | V | G | K | D | P | S | G | S | P | F | N | S | L | V | Q | L | E | M | E | Q |
Query Conservation |   |
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
| . |
|
|   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|
|   |   |   |   |   |
| . |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
F | A | K | L | E | Q | D | F | G | G | S | I | G | V | Y | A | M | D | T | G | S | G | A | T | V | S | Y | R | . |
A | E | E | R | F | P | L | C | S | S | F | K | G | F | L | A | A | A | V | L | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | Q | Q | Q | A | G | L | L | D | T | P | I | R | Y | G | K | N | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  | S | . | T | T | S |
|  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  | T | T | S | T | T | T | T | T |
|  |  |
|
|
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | P | R | N | P | F | I | N | A | G | A | L | V | V | C | D | M | L | Q | G | R | L | S | A | P | R | Q | R | M | L | E | V | V | R | G | L | S | G | V | S | D | I | S | Y | D | T | V | V | A | R | S | E | F | E | H | S | A | R | N | A | A | I | A | W | L | M | K | S | F | G | N | F | H | H | D | V | T | T | V |
Query Conservation |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   | . | . |
|   |
|   |   |   |
|   |   |   |
|
| . | . | . | . | . |
|   |   |   |
Template Sequence |   |
L | V | P | W | S | P | I | S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | Y | L | T | T | G | M | T | V | A | E | L | S | A | A | A | V | Q | Y | S | D | . |
. |
N | A | A | A | N | L | L | L | K | E | L | G | . |
. |
. |
. |
. |
G | P | A | G |
Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
. | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
|
. | . | . | . |
  |
  |   |
189 | 190 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | N | Y | F | H | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | A | L | K | M | S | C | V | E | L | A | R | T | F | V | F | L | A | N | Q | G | K | A | I | H | I | D | E | P | V | V | T | P | M | Q | A | R | Q | I | N | A | L | M |
Query Conservation |   |
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | T | A | F | M | R | S | I | G | D | T | T | F | R | L | D | R | W | E | L | E | L | N | S | A | I | P | G | D | A | R | D | T | S | S | P | R | A | V | T | E | S | L | Q | K | L | T | L | . |
. |
. |
. |
. |
. |
. |
. |
G | S | A | L | A | A | P | Q | R | Q | Q | F | V | D | W | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
| S | S |
| B |
|
|
|
| T | T | G | G | G |
|
|
| T | T |
|
| T | T |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
  |