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| Job Description | P0A6W0 | | Confidence | 21.10% | Date | Thu Jan 5 11:04:02 GMT 2012 |
| Rank | 119 | Aligned Residues | 26 |
| % Identity | 12% | Template | c2xi1A_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:nef; |
PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample
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| Resolution | 3.50 Å |
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171 | . | . | . | . | . | . | . | . | 180 | . | . | . | |
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| Query Sequence | |
I | A | W | L | M | K | S | F | G | N | F | H | H | . |
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D | V | T | T | V | L | Q | N | Y | F | H | Y | C |
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| Template Conservation | |
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| Template Sequence | |
L | S | F | F | L | K | E | K | G | G | L | E | G | L | V | Y | S | Q | R | E | K | E | I | L | D | L | W | V | Y | H | T |
| Template Known Secondary structure | |
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| Template Predicted Secondary structure | |
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87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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