Job Description P0A6W0 Confidence 95.32% Date Thu Jan 5 11:04:02 GMT 2012 Rank 40 Aligned Residues 222 % Identity 14% Template c2wuqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi Resolution 1.80 Å

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		42	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																																								.
Query SS confidence									.																																																																								.
Query Sequence		G	I	A	I	C	T	V	.	D	G	Q	L	F	Q	A	G	D	A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	L	V	Q	L	E	M	E	Q	G	I	P	R	N	P	F	I	N	A	G	.
Query Conservation									.																																																																								.
Alig confidence									.									.																							.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																		.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	L	V	R	D	L	Y	T	G	E	E	L	G	I	D	.	P	D	T	E	L	P	T	A	S	L	V	K	L	P	L	A	L	A	T	L	E	R	.	.	.	.	.	.	.	.	.	.	.	I	R	L	G	E	V	D	G	A	Q	Q	I	E	V	A	P	G	R	I	T	T	P	G	P	T	G	L	S	R	F
Template Known Secondary structure								T	T	T							S	.	T	T						G	G	G	G												.	.	.	.	.	.	.	.	.	.	.			T	T	S	S		T	T												S	S	S			G	G	G	G
Template Predicted Secondary structure																		.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60												.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																							.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																																							.	.
Query Sequence		.	.	.	.	.	.	.	.	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R	Q	R	M	L	E	V	V	R	G	L	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H	D	V	T	T	V	L	.	.
Query Conservation		.	.	.	.	.	.	.	.																																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	H	P	A	R	V	A	V	D	D	L	L	Y	L	S	T	S	V	S	D	G	T	A	S	D	A	L	F	E	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	Q	V	E	Q	M	V	R	E	W	G	F	R	D	L	T	V	R	H	S	M	R	E
Template Known Secondary structure		S	S																S													S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T			S							T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.																																																																			.	.
Query SS confidence		.	.	.																																																																			.	.
Query Sequence		.	.	.	Q	N	Y	F	H	Y	C	A	L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	K	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M	A	T	S	G	M	Y	Q	N	A	G	E	F	A	W	R	V	G	.	.	L	P	A	K	S	G	V	G	G
Query Conservation		.	.	.																																																																			.	.
Alig confidence		.	.	.																												.	.	.	.																																				.	.
Template Conservation																																.	.	.	.
Template Sequence		H	R	V	P	Q	L	D	V	A	R	A	N	T	G	T	A	R	A	F	V	D	L	L	E	A	L	W	A	P	V	.	.	.	.	L	T	G	P	A	L	P	P	E	P	A	A	R	L	R	E	L	M	A	A	N	L	L	R	H	R	L	A	P	D	F	A	S	D	A	A	T	W	S	S	K	T	G	T	L	L
Template Known Secondary structure				S	G	G	G		T	T	T	S																	G	G	G	.	.	.	.																				T					S	S	S						B	T	T											T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		265	.	.	.	.	270						.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure								.	.	.	.	.			.	.
Query SS confidence								.	.	.	.	.			.	.
Query Sequence		G	I	V	A	I	V	.	.	.	.	.	P	H	.	.	E	M	A	I	A	V	W	S	P	E	L	D	D	A	G	N	S	L	A	G	I	A	V	L	E	Q	L	T	K	Q	L
Query Conservation								.	.	.	.	.			.	.
Alig confidence								.	.	.	.	.			.	.
Template Conservation
Template Sequence		N	L	R	H	E	V	G	V	V	E	H	A	D	G	Q	V	F	A	V	A	V	L	T	E	S	Q	V	P	A	D	S	Q	P	G	A	E	A	L	M	A	Q	V	A	R	R	L
Template Known Secondary structure		T											T	T	S												S	S			S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions