Job Description P0A6W0 Confidence 95.97% Date Thu Jan 5 11:04:02 GMT 2012 Rank 37 Aligned Residues 248 % Identity 15% Template c2ov5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:carbapenemase; PDBTitle: crystal structure of the kpc-2 carbapenemase Resolution 1.85 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Y	I	P	A	L	A	T	V	D	G	S	R	L	G	I	A	I	C	T	V	D	G	Q	L	F	Q	A	G	D	A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	L	V	Q	L	E	M
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	P	F	A	K	L	E	Q	D	F	G	G	S	I	G	V	Y	A	M	D	T	G	S	G	A	T	V	S	Y	R	A	E	E	R	F	P	L	C	S	S	F	K	G	F	L	A	A	A	V	L	A	R	.	.	.	.	.	.	.	.	.	.	.	S	Q	Q	Q	A	G	L	L	D	T	P	I	R	Y	G	K
Template Known Secondary structure													T	S									T	T	T							S	T	T	S					G	G	G													.	.	.	.	.	.	.	.	.	.	.			S	S	T	T	S	T	T							G
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.												.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	I	P	R	N	P	F	I	N	A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R	Q	R	M	L	E	V	V	R	G	L	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H	D	V	T
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		N	A	L	V	P	W	S	P	.	.	.	.	.	.	.	.	I	S	E	K	Y	L	T	T	G	M	T	.	.	.	.	V	A	E	L	S	A	A	A	V	Q	Y	S	D	N	A	A	A	N	L	L	L	K	E	L	G	G	P	A	G	L	T	A	F	M	R	S	I	G	D	T	T	F	R	L	D	R	W	E	L
Template Known Secondary structure		G	G			S	S			.	.	.	.	.	.	.	.					T	T	T	T				.	.	.	.											S													T	T												T	T		S	S		B			S		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		T	V	L	Q	N	Y	F	H	Y	C	A	L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	K	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M	A	T	S	G	M	Y	Q	N	A	G	E	F	A	W	R	V	G	L	P	.	.	A	K	S	G	V	G	G
Query Conservation																																																																									.	.
Alig confidence																														.	.	.	.	.	.	.	.																																				.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		E	L	N	S	A	I	P	G	D	A	R	D	T	S	S	P	R	A	V	T	E	S	L	Q	K	L	T	L	.	.	.	.	.	.	.	.	G	S	A	L	A	A	P	Q	R	Q	Q	F	V	D	W	L	K	G	N	T	T	G	N	H	R	I	R	A	A	V	P	A	D	W	A	V	G	D	K	T	G	T	C	G
Template Known Secondary structure		G	G	G				T	T			T	T																T	.	.	.	.	.	.	.	.	S	S	S	S														T		S	S		T	T	T	G	G	G	G	S		S	S	S										S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.									.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		265						.	.	.	.	270		.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.						.			.	.	.	.	.
Query SS confidence			.	.	.	.	.						.			.	.	.	.	.
Query Sequence		G	.	.	.	.	.	I	V	A	I	V	.	P	H	.	.	.	.	.	E	M	A	I	A	V	W	S	P	E	L	D	D	A	G	N	S	L	A	G	I	A	V	L	E	Q	L	T	K	Q	L	G	R
Query Conservation			.	.	.	.	.						.			.	.	.	.	.
Alig confidence			.	.	.	.	.						.			.	.	.	.	.
Template Conservation
Template Sequence		V	Y	G	T	A	N	D	Y	A	V	V	W	P	T	G	R	A	P	I	V	L	A	V	Y	T	R	A	P	N	K	D	D	K	H	S	E	A	V	I	A	A	A	A	R	L	A	L	E	G	L	G	V
Template Known Secondary structure		S	T	T											T	T	S												S	S	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions