Job Description P0A6W0 Confidence 96.29% Date Thu Jan 5 11:04:02 GMT 2012 Rank 34 Aligned Residues 148 % Identity 16% Template c2bg1A_ PDB info PDB header:peptidoglycan Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: active site restructuring regulates ligand recognition in2 classa penicillin-binding proteins (pbps) Resolution 1.9 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	Q	E	R	F	S	I	Q	S	I	S	K	V	L	S	.	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	L	V	Q	L	E	M	E	Q	G	I	P	R	N	P	F	I	N	A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R	Q
Query Conservation																	.
Alig confidence																	.								.	.	.	.	.	.	.	.	.	.													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	T	K	R	S	P	A	S	T	T	K	P	L	L	A	Y	G	I	A	I	D	Q	.	.	.	.	.	.	.	.	.	.	G	L	M	G	S	E	T	I	L	S	N	Y	.	P	T	N	F	A	N	G	N	P	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	N	S	K	G	T
Template Known Secondary structure		T	T			B			G	G	G	G					T							T	.	.	.	.	.	.	.	.	.	.	T	S			T	T						S	.			B		T	T	S		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.											.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.																	.	.	500	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	E	V	V	R	G	L	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	F	H	H	D	V	T	T	V	L	Q	N	Y	F	H	Y	C	A	L	K	M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G
Query Conservation
Alig confidence													.	.	.	.																													.																.
Template Conservation													.	.	.	.																													.																.
Template Sequence		G	M	M	T	L	G	E	A	L	N	Y	.	.	.	.	S	W	N	I	P	A	Y	W	T	Y	R	M	L	R	E	N	G	V	D	V	K	G	Y	M	E	K	M	G	.	Y	E	I	P	E	Y	G	I	E	S	L	P	M	G	G	.	G	I	E	V	T	V	A	Q	H	T	N	G	Y	Q	T	L	A	N	N	G
Template Known Secondary structure													.	.	.	.	T		S													T	T										T	T	.				S					T	T	G	G	G	T	T	.	T			B														T	T	T
Template Predicted Secondary structure													.	.	.	.																													.																.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.					.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
																						217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	H	Q	K	H	V	I	S	K	I	E	A	A	D	G	R	V	V	Y	E	Y	Q	D	K	P	V	Q	V	Y	S	K	A	T	A	T	I	M	Q	G	L	L
Template Known Secondary structure							B	S							T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions