Job Description P0A6W0 Confidence 96.43% Date Thu Jan 5 11:04:02 GMT 2012 Rank 27 Aligned Residues 187 % Identity 19% Template c1qmfA_ PDB info PDB header:peptidoglycan synthesis Chain: A: PDB Molecule:penicillin-binding protein 2x; PDBTitle: penicillin-binding protein 2x (pbp-2x) acyl-enzyme complex Resolution 2.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.																							.	.	.	60
Predicted Secondary structure																																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	D	N	A	I	L	E	N	I	L	R	Q	V	R	P	L	I	G	Q	G	K	V	A	D	Y	I	P	A	L	A	T	V	D	G	S	R	L	G	I	A	I	C	T	V	.	D	G	Q	L	F	Q	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	Q	E
Query Conservation																																															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	S	S	P	L	Q	S	F	M	E	T	Q	M	D	A	F	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	K	V	K	G	K	Y	M	T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	D	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S
Template Known Secondary structure		S																			.	.	.	.	.	.	.	.	.	.	.	.					S									T	T	T		B								S				T	T	T		T	T			T	T						T	T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.													.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		R	F	S	I	Q	S	I	S	K	V	L	S	L	V	V	A	M	R	H	Y	S	E	E	E	I	W	Q	R	V	G	K	D	P	S	G	S	P	F	N	S	L	V	Q	L	E	M	E	Q	G	I	P	R	N	P	F	I	N	.	.	.	.	.	A	G	A	L	V	V	C	D	M	L	Q	G	R	L	S	A	P	R
Query Conservation																																																											.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.													.																.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.													.
Template Sequence		N	Y	E	P	G	S	T	M	K	V	M	M	L	A	A	A	I	D	N	.	.	.	.	.	.	.	.	.	.	N	T	F	P	G	G	E	V	F	N	S	S	.	E	L	K	I	A	D	A	T	I	R	D	W	D	V	N	E	G	L	T	G	G	R	M	M	T	F	S	Q	G	F	A	H	S	S	N	V	G	M
Template Known Secondary structure			B			G	G	G	G											T	.	.	.	.	.	.	.	.	.	.	T				T	T						S	.				S	S	S										S		T	T		S											T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350											.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	M	L	E	V	V	R	G	L	S	G	V	S	D	I	S	Y	D	T	V	V	A	R	S	E	F	E	H	S	A	R	N	A	A	I	A	W	L	M	K	S	F	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	H	D	V	T	T	V	L	Q	N	Y	F	H	Y	C	A	L	K
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template Sequence		T	L	L	E	Q	K	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	T	W	L	D	Y	L	N	R	F	K	F	G	V	P	T	R	F	G	L	T	D	E	Y	A	G	Q	L	P	A	D	N	I	V	N	I	A	Q	S	S	F	G	Q	G	.	I	S
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T	T	S					S	S	S	S					B				S	S	T	T					G	G	G	T		S	.		B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Template SS confidence
		401	.	.	.	.	.	.	.																									.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	C	V	E	L	A	R	T	F	V	F	L	A	N	Q	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	H	I	D	E	P	V	V	T	P	M	Q	A	R	Q	I	N	A	L	M
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	Q	T	Q	M	I	R	A	F	T	A	I	A	N	D	G	V	M	L	E	P	K	F	I	S	A	I	Y	D	P	N	D	Q	T	A	R	K	S	Q	K	E	I	V	G	N	P	V	S	K	D	A	A	S	L	T	R	T	N	M
Template Known Secondary structure		B														T	T	T						B								T	T	T	T														S
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions