Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6W0
Confidence88.54%DateThu Jan 5 11:04:02 GMT 2012
Rank59Aligned Residues41
% Identity27%Templatec1pmdA_
PDB info PDB header:peptidoglycan synthesisChain: A: PDB Molecule:peptidoglycan synthesis multifunctional enzyme; PDBTitle: penicillin-binding protein 2x (pbp-2x)
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210....... ..220.........230........
Predicted Secondary structure 




.....................









Query SS confidence 



















. . . . . . . . . . . . . . . . . . . . .




















Query Sequence  LKMSCVELARTFVFLANQGK. . . . . . . . . . . . . . . . . . . . . AIHIDEPVVTPMQARQINALM
Query Conservation 
 

  


  





 
 ..................... 
 


 

     
 


 
Alig confidence 



















.....................




















Template Conservation    






 






 
    
  
  
 
  
  
           

   
      
Template Sequence  ISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNM
Template Known Secondary structure 

TTTT


B



SSSS






S
Template Predicted Secondary structure 

























Template SS confidence 





























































   454.....460.........470.........480.........490.........500.........510.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions