Job Description P25736 Confidence 4.99% Date Thu Jan 5 11:42:21 GMT 2012 Rank 47 Aligned Residues 55 % Identity 24% Template c3jywM_ PDB info PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l16(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution Resolution 8.90 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W	E	H	V	V	P	A	W	Q	F	G	H	Q	R	Q	C	W	Q	D	G	G	R	K	N	C	A	K	D	P	V	Y	R	K	M	E	S	D	M	H	N	L	Q	P	S	V	G	E	V	N	G	D	R	G	N	F	M	Y
Query Conservation
Alig confidence																																	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		V	R	A	E	E	L	N	I	S	G	E	F	F	R	N	K	L	K	Y	H	D	F	L	R	K	A	T	A	F	N	K	.	.	.	.	T	R	G	P	F	H	F	R	A	P	S	R	I	F	Y	K	A	L	R	G	M	V	S	H
Template Known Secondary structure				S	T	T	S						S	S					S		S	S	S	S	S	S	T	T	S				.	.	.	.	S	S	S					S	S	T	T	T						T	T	S	S	S		S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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