Return to main results Retrieve Phyre Job Id

Job DescriptionP25736
Confidence10.56%DateThu Jan 5 11:42:21 GMT 2012
Rank15Aligned Residues29
% Identity21%Templatec3gpqA_
PDB info PDB header:viral protein/rnaChain: A: PDB Molecule:non-structural protein 3; PDBTitle: crystal structure of macro domain of chikungunya virus in complex with2 rna
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........
Predicted Secondary structure 

















Query SS confidence 





























Query Sequence  PVYRKMESDMHNLQPSVGEVNGDRGNFMYS
Query Conservation 
    
 





 


  


 


  
 
Alig confidence 












.















Template Conservation      
  


   .  




 

     
Template Sequence  PSYRVKRMDIAKN. DEECVVNAANPRGLPG
Template Known Secondary structure 

S
GGG
.
SS


TT



Template Predicted Secondary structure 







.








Template SS confidence 





























   2.......10.... .....20.........30
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions