|   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | L | I | T | K | K | C | I | N | C | . |
. |
D | M | C | E | P | E | C | P | N | E | A | I | S | M | G | D | H | I | Y | E | I | N | S | D | K | C | T | E | C | V | G | H | Y | E | T | P | T | C | Q | K | V | C | P | I | P | N | T | I | V | K | D | P | A | H | V | E | T | E | E | Q | L | W | D | K | F | V | L |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|   |
| . | . |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
| . | . | . | . | . | . |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | Y | V | I | T | E | P | C | I | G | T | K | D | A | S | C | V | E | V | C | P | V | D | C | I | H | E | G | E | D | Q | Y | Y | I | D | P | D | V | C | I | D | C | . |
. |
. |
. |
. |
. |
G | A | C | E | A | V | C | P | V | S | A | I | Y | H | E | D | . |
F | V | P | E | E | W | K | S | Y | I | Q | K | N | R | D |
Template Known Secondary structure |   |
|  |  |
|
| S | T | T | T | T |
|
|
|
| S | S | T | T | T |
| T | T |
|
|  |  |  |
| S | S | S |  |  |  |
| T | T | T |
|
| S |
| . | . | . | . | . | . |
| S |  |  |  |  | S | G | G | G | S | S |  |  | T | T | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|  |  |
|
|
|
|
|
|  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
80 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
M | H | H | A |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |   |   |
Template Sequence |   |
F | F | K | K |
Template Known Secondary structure |   |
 | T | T |
|
Template Predicted Secondary structure |   |
 |  |
|
|
Template SS confidence |   |
|
|
|
|
  |   |
74 | . | . | . |
  |