 |
Job Description | P52102 | Confidence | 96.16% | Date | Thu Jan 5 12:05:20 GMT 2012 |
Rank | 61 | Aligned Residues | 45 |
% Identity | 33% | Template | c3cf4A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; |
PDBTitle: structure of the codh component of the m. barkeri acds complex
|
Resolution | 2.00 Å |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | C | I | N | C | D | M | C | E | P | E | C | P | N | E | A | I | S | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | H | I | Y | E | I | N | S | D | K | C | T | E | C | V | G | H | Y | E | T | P | T | C | Q | K | V | C | P | I | P |
Query Conservation |   |
|   |
|
|   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|
|
|
| . | . | . | . | . | . |
|   |
|
|   |   |
|
|   |   |
Template Sequence |   |
A | K | C | A | D | C | G | A | C | L | L | A | C | P | E | E | I | D | I | P | E | A | M | G | F | A | K | K | G | D | F | S | Y | F | E | E | I | H | D | T | C | I | G | C | . |
. |
. |
. |
. |
. |
R | R | C | E | Q | V | C | K | K | E |
Template Known Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| T |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 460 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|