Job Description P36649 Confidence 98.00% Date Thu Jan 5 11:53:29 GMT 2012 Rank 110 Aligned Residues 99 % Identity 16% Template d2cuaa_ SCOP info Cupredoxin-like Cupredoxins Periplasmic domain of cytochrome c oxidase subunit II Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	Q	S	T	F	G	G	K	T	A	T	T	W	G	Y	N	G	N	L	L	G	P	A	V	K	L	Q	R	G	K	A	V	T	V	D	I	Y	N	Q	L	T	E	E	T	T	L	H	W	H	G	L	E	V	P	G	E	V	D	G	G	P	Q	G	I	I	P	P	G	G	K	R	S	V	T	L	N	V	D
Query Conservation
Alig confidence																																										.	.	.					.	.	.									.	.	.
Template Conservation																																										.	.	.					.	.	.									.	.	.
Template Sequence		A	V	V	Q	T	G	P	N	Q	Y	T	V	Y	V	L	A	F	A	F	G	Y	Q	P	N	P	I	E	V	P	Q	G	A	E	I	V	F	K	I	T	S	.	.	.	P	D	V	I	.	.	.	H	G	F	H	V	E	G	T	.	.	.	N	I	N	V	E	V	L	P	G	E	V	S	T	V	R	Y	T	F	K
Template Known Secondary structure								T	T										T	T				S	S	S					T	T	S								B	.	.	.	S	S	S		.	.	.						T	T	S	.	.	.	S							B	T	B
Template Predicted Secondary structure																																										.	.	.					.	.	.									.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.				.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	A	A	T	C	W	F	H	P	H	Q	H	G	K	T	G	R	Q	V	A	M	G	L	A	G	L	V	V	I	E	D
Query Conservation
Alig confidence				.																.	.	.
Template Conservation				.																.	.	.
Template Sequence		R	P	.	G	E	Y	R	I	I	C	N	Q	Y	C	G	L	G	H	.	.	.	Q	N	M	F	G	T	I	V	V	K	E
Template Known Secondary structure		S		.									S			S	T	T	S	.	.	.	T	T
Template Predicted Secondary structure				.																.	.	.
Template SS confidence
		141	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions