 |
Job Description | P36649 | Confidence | 99.17% | Date | Thu Jan 5 11:53:29 GMT 2012 |
Rank | 84 | Aligned Residues | 81 |
% Identity | 12% | Template | d1sdda2 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | 2.80 |
|
 |
  |   |
403 | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | |
. | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | H | H | A | N | K | I | N | G | Q | A | F | D | M | N | K | P | M | F | A | A | A | K | G | Q | Y | E | R | W | V | I | S | G | V | G | D | M | . |
M | L | H | P | F | H | I | H | G | T | Q | F | R | I | L | S | E | N | G | K | P | P | A | A | H | R | A | G | W | K | D | T | V | K | V | E | G | N | V | S | E |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   | . |   |   |
|
|   |
|
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|
| . | . | . | . | . | . | . |
|
|   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |
|
|
|   |
|   |
|
| . | . | . |
Template Sequence |   |
T | S | S | L | M | Y | T | V | N | G | Y | V | N | G | T | M | P | . |
. |
. |
. |
. |
. |
. |
D | I | T | V | C | A | H | L | I | G | M | S | S | G | P | E | L | F | S | I | H | F | N | G | Q | V | L | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | H | H | K | I | S | A | I | T | L | V | S | A | . |
. |
. |
Template Known Secondary structure |   |
|
|
|  |  |  |
| S | S | S |
|
| S | S |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
| B | B |
|
|
| S | S | S |
|  |  |
|
| B |
| S | S | T | T |
|  |  | . | . | . | . | . | . | . | . | . | . | . | T | T |  |  |
| S |
|
|
|  |  | T | T | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | |
|
|
  |
  |   |
482 | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | V | K | F | N | H | D | A | P | K | E | H | A | Y | M | A | H | C | H | L | L | E | H | E | D | T | G | M | M | L |
Query Conservation |   |
|   |
|
|
|   |
|   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |   |   |   |   |
| . | . |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
T | S | T | T | G | . |
. |
R | W | T | I | A | S | L | I | P | R | H | F | Q | A | G | M | Q | A |
Template Known Secondary structure |   |
. | . | . | . | . | . |
|
| B |
|
| . | . |
|
|
|
| B |
|
| S | T | T | T | G | G | G | T |
| B |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|  | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
264 | . | . | . | . | |
|
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|