 |
Job Description | P36649 | Confidence | 99.97% | Date | Thu Jan 5 11:53:29 GMT 2012 |
Rank | 51 | Aligned Residues | 151 |
% Identity | 17% | Template | d1ndsa1 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | UNK |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | P | L | W | S | R | A | V | F | A | A | E | R | P | T | L | P | I | P | D | L | L | T | T | D | A | R | N | R | I | Q | L | T | I | G | A | G | Q | S | T | F | . |
. |
G | G | K | T | A | T | T | W | G | Y | N | G | N | L | L | G | P | A | V | K | L | Q | R | G | K | A | V | T | V | D | I | Y | N | Q | L | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
G | L | P | R | V | A | V | D | L | V | A | P | P | L | V | H | P | H | S | Q | V | A | A | G | A | P | K | V | V | Q | F | R | M | S | I | E | E | K | K | M | V | A | D | D | D | G | T | T | A | Q | A | M | T | F | N | G | S | V | P | G | P | T | L | V | V | H | E | G | D | Y | I | E | L | T | L | V | N | P | A | T |
Template Known Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
| S |
|
|
|
|
|
|
| S | B |
|
| S |
|
|
|  |  |  |
|
|
| B |  |  |  |
|
|  |  |
| S | S | S |
|
|  |  |
|
|  |  |  | T | T | B | S | S |
|
|
|  |  |  |  | T | T |  |  |  |
|
|  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | T | T | L | H | W | H | G | L | E | V | P | G | E | V | D | G | G | P | Q | G | I | I | P | P | G | G | K | R | S | V | T | L | N | V | D | Q | P | A | A | T | C | W | F | H | P | H | Q | H | G | K | T | G | R | Q | V | A | M | G | L | A | G | L | V | V | I | E | D | D | E | I | L | K |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |   |   | . |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |
Template Sequence |   |
N | S | M | P | H | N | V | D | F | H | A | A | T | G | A | L | G | G | A | G | L | T | Q | V | V | P | G | Q | E | A | V | L | R | F | K | A | D | R | S | . |
G | T | F | V | Y | H | C | A | P | A | G | M | V | P | W | H | V | V | S | G | M | N | G | A | L | M | V | L | P | R | D | G | L | R |
Template Known Secondary structure |   |
S |
| S |
| B |
|
|  |  | T | T |
|
| S | S | T | T | T | T | S | S |
|
| B |
| T | T |
|  |  |  |
|
|  |  |  |
| S |
| . |  |  |  |  |  |  |
|
|
| T | T | T | T | T | T | T | T | T | T | T |
|
|
|  |  |  |  |  |
| T | B |
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|