 |
Job Description | P36649 | Confidence | 100.00% | Date | Thu Jan 5 11:53:29 GMT 2012 |
Rank | 37 | Aligned Residues | 118 |
% Identity | 25% | Template | d1gyca1 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | 1.9 |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
R | N | R | I | Q | L | T | I | G | A | G | Q | S | T | F | G | G | K | T | A | T | T | W | G | Y | N | G | N | L | L | G | P | A | V | K | L | Q | R | G | K | A | V | T | V | D | I | Y | N | Q | L | T | E | E | . |
. |
. |
. |
. |
T | T | L | H | W | H | G | L | E | V | . |
. |
P | G | E | V | D | G | G | P | . |
. |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |   |   | . | . | . | . | . |
|
|
|
|
|
|
|
|   |   | . | . |   |   |   |   |
|
|
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | P | A | A | S | L | V | V | A | N | A | P | V | S | P | D | G | F | L | R | D | A | I | V | V | N | G | V | F | P | S | P | L | I | T | G | K | K | G | D | R | F | Q | L | N | V | V | D | T | L | T | N | H | T | M | L | K | S | T | S | I | H | W | H | G | F | F | Q | A | G | T | N | W | A | D | G | P | A | F | V |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  |  |  | T | T | B | S | S |
|
|
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
|
|
|
| G | G | G |
| S |
| B |
|  |  |  |  | T |
|
|
| T | T |
| G | G | G | S |
|
| B | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
|
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
Q | G | I | I | P | P | G | G | K | R | S | V | T | L | N | V | D | Q | P | A | A | T | C | W | F | H | P | H | Q | H | G | K | T | G | R | Q | V | A | M | G | L | A | G | L | V | V | I | E | D | D | E |
Query Conservation |   |
. |
|   |   |
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   | . | . | . | . |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|
Template Sequence |   |
N | Q | C | P | I | A | S | G | H | S | F | L | Y | D | F | H | V | P | D | Q | A | G | T | F | W | Y | H | S | H | L | . |
. |
. |
. |
S | T | Q | Y | C | D | G | L | R | G | P | F | V | V | Y | D | P | K |
Template Known Secondary structure |   |
T | B |
|
| B |
| T | T |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |
| S | . | . | . | . | T | T | G | G | G | G | T |
|  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|